ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d38C1 - ECOD Domain | ECOD

ECOD/Domains/e3d38C1

e3d38C1

UID: 000092324

PDB

Range: C:1-332
PDB: 3D38 chain C(all domains)
UniProt: P07173 (all domains)
Gene: pufC

Molecule: Photosynthetic reaction center cytochrome c subunit

3D Structure

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Related Domains

Browse other domains in CytoC_RC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupPhotosynthetic reaction centre (cytochrome subunit)(139.3)

TT-groupPhotosynthetic reaction centre (cytochrome subunit)(139.3.1)

FFamilyCytoC_RC(139.3.1.1)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Heptane-1,2,3-TriolHTO
drugDrugBank DB04079

+ 1 additive (Sulfate ion)

Pfam Families

PF02276CytoC_RC

Photosynthetic reaction centre cytochrome C subunit

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 3D38 RCSB PDB: 3D38 PDBe: 3D38 UniProt: P07173

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.