ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ps9A3 - ECOD Domain | ECOD

ECOD/Domains/e1ps9A3

e1ps9A3

UID: 000009291

RepresentativePDB

Range: A:331-465,A:628-671
PDB: 1PS9 chain A(all domains)
UniProt: P42593 (all domains)
Gene: fadH

Molecule: 2,4-dienoyl-CoA reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2, NAD_binding_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyPyr_redox_2, NAD_binding_8(2003.1.3.15)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Flavin mononucleotideFMN
drugDrugBank DB03247

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1PS9 RCSB PDB: 1PS9 PDBe: 1PS9 UniProt: P42593

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

5-Mercaptoethanol-2-decenoyl-coenzyme A

drugDrugBank DB03698

Nicotinamide adenine dinucleotide phosphateNAP

drugDrugBank DB03461

Chloride ionCL

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.