ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pb0C1 - ECOD Domain | ECOD

ECOD/Domains/e1pb0C1

e1pb0C1

UID: 000092937

PDB

Range: C:2-245
PDB: 1PB0 chain C(all domains)
UniProt: P75914 (all domains)
Gene: ycdX

Molecule: Hypothetical protein ycdX

3D Structure

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Related Domains

Browse other domains in PHP →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPHP(2002.1.1.102)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Formic acid, Sulfate ion)

Formic acidFMT
DrugBank DB01942
Sulfate ion

Pfam Families

PHP domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1PB0 RCSB PDB: 1PB0 PDBe: 1PB0 UniProt: P75914

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.