ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lrnA1 - ECOD Domain | ECOD

ECOD/Domains/e1lrnA1

e1lrnA1

UID: 000093901

PDB

Range: A:1002-1264
PDB: 1LRN chain A(all domains)
UniProt: O66496 (all domains)
Gene: kdsA

Molecule: KDO-8-phosphate synthetase

3D Structure

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Related Domains

Browse other domains in DAHP_synth_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_1(2002.1.1.35)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00793DAHP_synth_1

DAHP synthetase I family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1LRN RCSB PDB: 1LRN PDBe: 1LRN UniProt: O66496

Downloads

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