ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1lrnB1 - ECOD Domain | ECOD

ECOD/Domains/e1lrnB1

e1lrnB1

UID: 000093902

PDB

Range: B:2003-2264
PDB: 1LRN chain B(all domains)
UniProt: O66496 (all domains)
Gene: kdsA

Molecule: KDO-8-phosphate synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DAHP_synth_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDAHP_synth_1(2002.1.1.35)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00793DAHP_synth_1

DAHP synthetase I family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1LRN RCSB PDB: 1LRN PDBe: 1LRN UniProt: O66496

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure