ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hnfB2 - ECOD Domain | ECOD

ECOD/Domains/e3hnfB2

e3hnfB2

UID: 000956216

PDB

Range: B:215-737
PDB: 3HNF chain B(all domains)
UniProt: P23921 (all domains)
Gene: RRM1

Molecule: Ribonucleoside-diphosphate reductase large subunit

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 3HNF RCSB PDB: 3HNF PDBe: 3HNF UniProt: P23921

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.