ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1slqB1 - ECOD Domain | ECOD

ECOD/Domains/e1slqB1

e1slqB1

UID: 000957526

PDB

Range: B:248-477
PDB: 1SLQ chain B(all domains)
UniProt: P12473 (all domains)

Molecule: Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]

3D Structure

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Related Domains

Browse other domains in Rota_VP4_MID →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupVP4 membrane interaction domain(5091)

HH-groupVP4 membrane interaction domain(5091.1)

TT-groupVP4 membrane interaction domain(5091.1.1)

FFamilyRota_VP4_MID(5091.1.1.1)

Pfam Families

PF17477Rota_VP4_MID

Rotavirus VP4 membrane interaction domain

External Links

ECOD PDB View: 1SLQ RCSB PDB: 1SLQ PDBe: 1SLQ UniProt: P12473

Downloads

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