ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4df9F1 - ECOD Domain | ECOD

ECOD/Domains/e4df9F1

e4df9F1

UID: 000983152

PDB

Range: F:0-154
PDB: 4DF9 chain F(all domains)
UniProt: Q5L9L3 (all domains)
Gene: BF9343_3433

Molecule: putative peptidase

3D Structure

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Related Domains

Browse other domains in M64_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupN-terminal domain in metallo-endopeptidase BACOVA_00663(11.18)

TT-groupN-terminal domain in metallo-endopeptidase BACOVA_00663(11.18.1)

FFamilyM64_N(11.18.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 2 additives (Phosphate ion, Glycerol)

Phosphate ionPO4

Pfam Families

Peptidase M64 N-terminus

External Links

ECOD PDB View: 4DF9 RCSB PDB: 4DF9 PDBe: 4DF9 UniProt: Q5L9L3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.