ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1npdB1 - ECOD Domain | ECOD

ECOD/Domains/e1npdB1

e1npdB1

UID: 000098388

PDB

Range: B:107-288
PDB: 1NPD chain B(all domains)
UniProt: P0A6D5 (all domains)
Gene: ydiB

Molecule: Quinate/shikimate dehydrogenase (EC 1.1.1.282) (NAD-dependent shikimate 5-dehydrogenase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SDH_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilySDH_C(2003.1.1.76)

Pfam Families

Shikimate 5'-dehydrogenase C-terminal domain

External Links

ECOD PDB View: 1NPD RCSB PDB: 1NPD PDBe: 1NPD UniProt: P0A6D5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure