ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hupX1 - ECOD Domain | ECOD

ECOD/Domains/e4hupX1

e4hupX1

UID: 000985038

PDB

Range: X:1-263
PDB: 4HUP chain X(all domains)
UniProt: P02879 (all domains)

Molecule: Ricin

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
(2S)-2-[[(2S)-2-[2-[(2-azanyl-4-oxidanylidene-1H-pteridin-7-yl)carbonylamino]ethanoylamino]-3-phenyl-propanoyl]amino]-3-phenyl-propanoic acid19M

+ 1 additive (Sulfate ion)

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 4HUP RCSB PDB: 4HUP PDBe: 4HUP UniProt: P02879

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.