ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i0pG1 - ECOD Domain | ECOD

ECOD/Domains/e4i0pG1

e4i0pG1

UID: 000987543

PDB

Range: G:83-181
PDB: 4I0P chain G(all domains)
UniProt: P06340 (all domains)
Gene: HLA-DOA

Molecule: HLA class II histocompatibility antigen, DO alpha chain

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 4I0P RCSB PDB: 4I0P PDBe: 4I0P UniProt: P06340

Downloads

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Drug annotations from DrugDomain.