ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4h13H1 - ECOD Domain | ECOD

ECOD/Domains/e4h13H1

e4h13H1

UID: 000988132

PDB

Range: H:1-29
PDB: 4H13 chain H(all domains)
UniProt: P83798 (all domains)
Gene: petN

Molecule: Cytochrome b6-f complex subunit 8

3D Structure

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Related Domains

Browse other domains in PetN →

Classification

AArchitectureextended segments(a.20)

XX-groupPetN subunit of the cytochrome b6f complex(5026)

HH-groupPetN subunit of the cytochrome b6f complex(5026.1)

TT-groupPetN subunit of the cytochrome b6f complex(5026.1.1)

FFamilyPetN(5026.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
FerrohemeHEM
drugDrugBank DB18267
(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE

Pfam Families

PetN

External Links

ECOD PDB View: 4H13 RCSB PDB: 4H13 PDBe: 4H13 UniProt: P83798

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

8-HYDROXY-5,7-DIMETHOXY-3-METHYL-2-TRIDECYL-4H-CHROMEN-4-ONETDS

Shown in the structure viewer. Drug annotations from DrugDomain.