ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3vpdB2 - ECOD Domain | ECOD

ECOD/Domains/e3vpdB2

e3vpdB2

UID: 000990181

PDB

Range: B:1-88
PDB: 3VPD chain B(all domains)
UniProt: Q5SH23 (all domains)
Gene: lysX

Molecule: Alpha-aminoadipate--LysW ligase LysX (AAA--LysW ligase LysX) (EC 6.3.2.43)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LysX_preATP_grasp →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyLysX_preATP_grasp(2003.1.10.23)

Pfam Families

PF22626LysX_preATP_grasp

LysX preATP-grasp domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3VPD RCSB PDB: 3VPD PDBe: 3VPD UniProt: Q5SH23

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure