ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4b17A2 - ECOD Domain | ECOD

ECOD/Domains/e4b17A2

e4b17A2

UID: 000991579

PDB

Range: A:1-73
PDB: 4B17 chain A(all domains)
UniProt: P0ADR6 (all domains)
Gene: rlmM

Molecule: Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RlmM_FDX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin-like domain in ThiI(304.120)

TT-groupFerredoxin-like domain in ThiI(304.120.1)

FFamilyRlmM_FDX(304.120.1.2)

Pfam Families

PF18125RlmM_FDX

RlmM ferredoxin-like domain

External Links

ECOD PDB View: 4B17 RCSB PDB: 4B17 PDBe: 4B17 UniProt: P0ADR6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure