ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4atnA1 - ECOD Domain | ECOD

ECOD/Domains/e4atnA1

e4atnA1

UID: 000993799

RepresentativePDB

Range: A:1-73
PDB: 4ATN chain A(all domains)
UniProt: P0ADR6 (all domains)
Gene: rlmM

Molecule: Ribosomal RNA large subunit methyltransferase M (EC 2.1.1.186) (23S rRNA (cytidine2498-2'-O)-methyltransferase) (23S rRNA 2'-O-ribose methyltransferase RlmM)

3D Structure

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Related Domains

Browse other domains in RlmM_FDX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin-like domain in ThiI(304.120)

TT-groupFerredoxin-like domain in ThiI(304.120.1)

FFamilyRlmM_FDX(304.120.1.2)

Pfam Families

PF18125RlmM_FDX

RlmM ferredoxin-like domain

External Links

ECOD PDB View: 4ATN RCSB PDB: 4ATN PDBe: 4ATN UniProt: P0ADR6

Downloads

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