PDB 1L9U
X-RAY DIFFRACTION4.00 Å0 chains46 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Hview chain
3 domainsChain Jview chain
2 domainsChain Kview chain
2 domainsChain Lview chain
7 domainsChain Mview chain
8 domainsChain Nview chain
1 domainChain Qview chain
3 domainsAll Domains (46)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e1l9uA1 | A:6-49,A:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e1l9uA2 | A:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e1l9uB1 | B:6-49,B:173-225 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e1l9uB2 | B:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e1l9uC1 | C:143-331 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 6 | C | e1l9uC2 | C:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 7 | C | e1l9uC3 | C:663-700,C:834-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | C | e1l9uC4 | C:701-833 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 9 | C | e1l9uC5 | C:1000-1116 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 10 | C | e1l9uC6 | C:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 11 | C | e1l9uC7 | C:2-142,C:332-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 12 | D | e1l9uD1 | D:3-157,D:453-616 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 13 | D | e1l9uD2 | D:617-653,D:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 14 | D | e1l9uD3 | D:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 15 | D | e1l9uD6 | D:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 16 | D | e1l9uD8 | D:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 17 | D | e1l9uD7 | D:1201-1269,D:1331-1505 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 18 | D | e1l9uD5 | D:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 19 | D | e1l9uD4 | D:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 20 | E | e1l9uE1 | E:2-93 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 21 | H | e1l9uH2 | H:93-272 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 22 | H | e1l9uH3 | H:273-332 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 23 | H | e1l9uH4 | H:333-438 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 24 | J | e1l9uJ1 | J:6-49,J:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 25 | J | e1l9uJ2 | J:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 26 | K | e1l9uK1 | K:6-49,K:173-225 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 27 | K | e1l9uK2 | K:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 28 | L | e1l9uL1 | L:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 29 | L | e1l9uL2 | L:143-331 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 30 | L | e1l9uL3 | L:663-700,L:834-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 31 | L | e1l9uL4 | L:1000-1116 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 32 | L | e1l9uL5 | L:2-142,L:332-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 33 | L | e1l9uL6 | L:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 34 | L | e1l9uL7 | L:701-833 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 35 | M | e1l9uM1 | M:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 36 | M | e1l9uM2 | M:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 37 | M | e1l9uM3 | M:3-157,M:453-616 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 38 | M | e1l9uM4 | M:617-653,M:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 39 | M | e1l9uM5 | M:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 40 | M | e1l9uM6 | M:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 41 | M | e1l9uM7 | M:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 42 | M | e1l9uM8 | M:1201-1269,M:1331-1499 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 43 | N | e1l9uN1 | N:2-93 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 44 | Q | e1l9uQ2 | Q:93-272 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 45 | Q | e1l9uQ3 | Q:273-332 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 46 | Q | e1l9uQ4 | Q:333-438 | Sigma70_r4 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors