ECODEvolutionary Classification of Protein Domains

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PDB 1PDJ

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Dview chain

4 domains

e1pdjD1(D:201-231,D:296-376)e1pdjD2(D:4-110)e1pdjD3(D:111-200)e1pdjD4(D:232-295)

Chain Eview chain

4 domains

e1pdjE1(E:201-231,E:296-376)e1pdjE2(E:4-110)e1pdjE3(E:111-200)e1pdjE4(E:232-295)

Chain Fview chain

4 domains

e1pdjF1(F:201-231,F:296-376)e1pdjF2(F:4-110)e1pdjF3(F:111-200)e1pdjF4(F:232-295)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	D	e1pdjD1	D:201-231,D:296-376	Phage-tail_2	1 → 1.1 → 1.1.13
2	D	e1pdjD2	D:4-110	Phage-tail_1	1 → 1.1 → 1.1.13
3	D	e1pdjD3	D:111-200	Phage-tail_1	3070 → 3070.1 → 3070.1.1
4	D	e1pdjD4	D:232-295	Phage-tail_2	3071 → 3071.1 → 3071.1.1
5	E	e1pdjE1	E:201-231,E:296-376	Phage-tail_2	1 → 1.1 → 1.1.13
6	E	e1pdjE2	E:4-110	Phage-tail_1	1 → 1.1 → 1.1.13
7	E	e1pdjE3	E:111-200	Phage-tail_1	3070 → 3070.1 → 3070.1.1
8	E	e1pdjE4	E:232-295	Phage-tail_2	3071 → 3071.1 → 3071.1.1
9	F	e1pdjF1	F:201-231,F:296-376	Phage-tail_2	1 → 1.1 → 1.1.13
10	F	e1pdjF2	F:4-110	Phage-tail_1	1 → 1.1 → 1.1.13
11	F	e1pdjF3	F:111-200	Phage-tail_1	3070 → 3070.1 → 3070.1.1
12	F	e1pdjF4	F:232-295	Phage-tail_2	3071 → 3071.1 → 3071.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors