PDB 1VVJ
X-RAY DIFFRACTION3.26 Å0 chains108 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain QBview chain
1 domainChain QCview chain
2 domainsChain QDview chain
1 domainChain QEview chain
2 domainsChain QFview chain
1 domainChain QGview chain
1 domainChain QHview chain
2 domainsChain QIview chain
1 domainChain QJview chain
1 domainChain QKview chain
1 domainChain QLview chain
1 domainChain QMview chain
1 domainChain QNview chain
1 domainChain QOview chain
1 domainChain QPview chain
1 domainChain QQview chain
1 domainChain QRview chain
1 domainChain QSview chain
1 domainChain QTview chain
1 domainChain R0view chain
1 domainChain R1view chain
1 domainChain R2view chain
1 domainChain R3view chain
1 domainChain R4view chain
1 domainChain R5view chain
1 domainChain R6view chain
1 domainChain R7view chain
1 domainChain R8view chain
1 domainChain RDview chain
2 domainsChain REview chain
1 domainChain RFview chain
1 domainChain RGview chain
1 domainChain RHview chain
2 domainsChain RIview chain
2 domainsChain RNview chain
1 domainChain ROview chain
1 domainChain RPview chain
1 domainChain RQview chain
1 domainChain RRview chain
1 domainChain RSview chain
1 domainChain RTview chain
1 domainChain RUview chain
1 domainChain RVview chain
1 domainChain RWview chain
1 domainChain RXview chain
1 domainChain RYview chain
1 domainChain RZview chain
2 domainsChain XBview chain
1 domainChain XCview chain
2 domainsChain XDview chain
1 domainChain XEview chain
2 domainsChain XFview chain
1 domainChain XGview chain
1 domainChain XHview chain
2 domainsChain XIview chain
1 domainChain XJview chain
1 domainChain XKview chain
1 domainChain XLview chain
1 domainChain XMview chain
1 domainChain XNview chain
1 domainChain XOview chain
1 domainChain XPview chain
1 domainChain XQview chain
1 domainChain XRview chain
1 domainChain XSview chain
1 domainChain XTview chain
1 domainChain Y0view chain
1 domainChain Y1view chain
1 domainChain Y2view chain
1 domainChain Y3view chain
1 domainChain Y4view chain
1 domainChain Y5view chain
1 domainChain Y6view chain
1 domainChain Y7view chain
1 domainChain Y8view chain
1 domainChain YDview chain
2 domainsChain YEview chain
1 domainChain YFview chain
1 domainChain YGview chain
1 domainChain YHview chain
2 domainsChain YIview chain
2 domainsChain YNview chain
1 domainChain YOview chain
1 domainChain YPview chain
1 domainChain YQview chain
1 domainChain YRview chain
1 domainChain YSview chain
1 domainChain YTview chain
1 domainChain YUview chain
1 domainChain YVview chain
1 domainChain YWview chain
1 domainChain YXview chain
1 domainChain YYview chain
1 domainChain YZview chain
2 domainsAll Domains (108)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | QB | e1vvjQB1 | QB:4-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | QC | e1vvjQC1 | QC:2-105 | KH_2 | 327 → 327.11 → 327.11.1 |
| 3 | QC | e1vvjQC2 | QC:106-206 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 4 | QD | e1vvjQD1 | QD:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 5 | QE | e1vvjQE1 | QE:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 6 | QE | e1vvjQE2 | QE:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 7 | QF | e1vvjQF1 | QF:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 8 | QG | e1vvjQG1 | QG:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 9 | QH | e1vvjQH1 | QH:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 10 | QH | e1vvjQH2 | QH:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 11 | QI | e1vvjQI1 | QI:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 12 | QJ | e1vvjQJ1 | QJ:3-101 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 13 | QK | e1vvjQK1 | QK:11-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 14 | QL | e1vvjQL1 | QL:5-129 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 15 | QM | e1vvjQM1 | QM:2-122 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 16 | QN | e1vvjQN1 | QN:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 17 | QO | e1vvjQO1 | QO:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 18 | QP | e1vvjQP1 | QP:1-84 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 19 | e1vvjQQ1 | QQ:2-101 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 | |
| 20 | QR | e1vvjQR1 | QR:19-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 21 | QS | e1vvjQS1 | QS:2-85 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 22 | QT | e1vvjQT1 | QT:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 23 | R0 | e1vvjR01 | R0:2-83 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 24 | R1 | e1vvjR11 | R1:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 25 | R2 | e1vvjR21 | R2:4-72 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 26 | R3 | e1vvjR31 | R3:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 27 | R4 | e1vvjR41 | R4:1-50 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 28 | R5 | e1vvjR51 | R5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 29 | R6 | e1vvjR61 | R6:5-53 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 30 | R7 | e1vvjR71 | R7:1-49 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 31 | R8 | e1vvjR81 | R8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 32 | RD | e1vvjRD1 | RD:127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 33 | RD | e1vvjRD2 | RD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 34 | RE | e1vvjRE1 | RE:1-205 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 35 | RF | e1vvjRF1 | RF:6-207 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 36 | RG | e1vvjRG1 | RG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 37 | RH | e1vvjRH1 | RH:83-171 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 38 | RH | e1vvjRH2 | RH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 39 | RI | e1vvjRI1 | RI:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 40 | RI | e1vvjRI2 | RI:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 41 | RN | e1vvjRN1 | RN:1-138 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 42 | RO | e1vvjRO1 | RO:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 43 | RP | e1vvjRP1 | RP:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 44 | RQ | e1vvjRQ1 | RQ:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 45 | RR | e1vvjRR1 | RR:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 46 | RS | e1vvjRS1 | RS:2-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 47 | RT | e1vvjRT1 | RT:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 48 | RU | e1vvjRU1 | RU:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 49 | RV | e1vvjRV1 | RV:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 50 | RW | e1vvjRW1 | RW:1-113 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 51 | RX | e1vvjRX1 | RX:3-94 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 52 | RY | e1vvjRY1 | RY:2-103 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 53 | RZ | e1vvjRZ1 | RZ:93-172 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 54 | RZ | e1vvjRZ2 | RZ:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 55 | XB | e1vvjXB1 | XB:4-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 56 | XC | e1vvjXC1 | XC:2-105 | KH_2 | 327 → 327.11 → 327.11.1 |
| 57 | XC | e1vvjXC2 | XC:106-206 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 58 | XD | e1vvjXD1 | XD:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 59 | XE | e1vvjXE1 | XE:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 60 | XE | e1vvjXE2 | XE:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 61 | XF | e1vvjXF1 | XF:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 62 | XG | e1vvjXG1 | XG:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 63 | XH | e1vvjXH1 | XH:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 64 | XH | e1vvjXH2 | XH:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 65 | XI | e1vvjXI1 | XI:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 66 | XJ | e1vvjXJ1 | XJ:3-101 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 67 | XK | e1vvjXK1 | XK:11-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 68 | XL | e1vvjXL1 | XL:5-129 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 69 | XM | e1vvjXM1 | XM:2-122 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 70 | XN | e1vvjXN1 | XN:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 71 | XO | e1vvjXO1 | XO:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 72 | XP | e1vvjXP1 | XP:1-84 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 73 | XQ | e1vvjXQ1 | XQ:2-101 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 74 | XR | e1vvjXR1 | XR:19-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 75 | XS | e1vvjXS1 | XS:2-85 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 76 | XT | e1vvjXT1 | XT:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 77 | Y0 | e1vvjY01 | Y0:2-83 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 78 | Y1 | e1vvjY11 | Y1:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 79 | Y2 | e1vvjY21 | Y2:4-72 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 80 | Y3 | e1vvjY31 | Y3:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 81 | Y4 | e1vvjY41 | Y4:1-50 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 82 | Y5 | e1vvjY51 | Y5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 83 | Y6 | e1vvjY61 | Y6:5-53 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 84 | Y7 | e1vvjY71 | Y7:1-49 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 85 | Y8 | e1vvjY81 | Y8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 86 | YD | e1vvjYD1 | YD:127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 87 | YD | e1vvjYD2 | YD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 88 | YE | e1vvjYE1 | YE:1-205 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 89 | YF | e1vvjYF1 | YF:6-207 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 90 | YG | e1vvjYG1 | YG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 91 | YH | e1vvjYH1 | YH:83-171 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 92 | YH | e1vvjYH2 | YH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 93 | YI | e1vvjYI1 | YI:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 94 | YI | e1vvjYI2 | YI:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 95 | YN | e1vvjYN1 | YN:1-138 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 96 | YO | e1vvjYO1 | YO:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 97 | YP | e1vvjYP1 | YP:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 98 | YQ | e1vvjYQ1 | YQ:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 99 | YR | e1vvjYR1 | YR:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 100 | YS | e1vvjYS1 | YS:2-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 101 | YT | e1vvjYT1 | YT:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 102 | YU | e1vvjYU1 | YU:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 103 | YV | e1vvjYV1 | YV:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 104 | YW | e1vvjYW1 | YW:1-113 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 105 | YX | e1vvjYX1 | YX:3-94 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 106 | YY | e1vvjYY1 | YY:2-103 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 107 | YZ | e1vvjYZ1 | YZ:93-172 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 108 | YZ | e1vvjYZ2 | YZ:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors