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PDB 1VVJ

X-RAY DIFFRACTION3.26 Å0 chains108 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (108)

#ChainDomain IDRangeFamilyClassification
1QBe1vvjQB1QB:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
2QCe1vvjQC1QC:2-105KH_2327 → 327.11 → 327.11.1
3QCe1vvjQC2QC:106-206Ribosomal_S3_C230 → 230.2 → 230.2.1
4QDe1vvjQD1QD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
5QEe1vvjQE1QE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
6QEe1vvjQE2QE:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
7QFe1vvjQF1QF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
8QGe1vvjQG1QG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
9QHe1vvjQH1QH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
10QHe1vvjQH2QH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
11QIe1vvjQI1QI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
12QJe1vvjQJ1QJ:3-101Ribosomal_S10304 → 304.44 → 304.44.1
13QKe1vvjQK1QK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
14QLe1vvjQL1QL:5-129Ribosom_S12_S232 → 2.1 → 2.1.1
15QMe1vvjQM1QM:2-122Ribosomal_S13102 → 102.2 → 102.2.1
16QNe1vvjQN1QN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
17QOe1vvjQO1QO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
18QPe1vvjQP1QP:1-84Ribosomal_S16837 → 837.1 → 837.1.1
19QQe1vvjQQ1QQ:2-101Ribosomal_S172 → 2.1 → 2.1.1
20QRe1vvjQR1QR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
21QSe1vvjQS1QS:2-85Ribosomal_S19838 → 838.1 → 838.1.1
22QTe1vvjQT1QT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
23R0e1vvjR01R0:2-83Ribosomal_L27325 → 325.1 → 325.1.8
24R1e1vvjR11R1:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
25R2e1vvjR21R2:4-72Ribosomal_L29192 → 192.4 → 192.4.1
26R3e1vvjR31R3:2-60Ribosomal_L30887 → 887.1 → 887.1.1
27R4e1vvjR41R4:1-50Ribosomal_L314987 → 4987.1 → 4987.1.1
28R5e1vvjR51R5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
29R6e1vvjR61R6:5-53Ribosomal_L33375 → 375.1 → 375.1.1
30R7e1vvjR71R7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
31R8e1vvjR81R8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
32RDe1vvjRD1RD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
33RDe1vvjRD2RD:2-126Ribosomal_L22 → 2.1 → 2.1.1
34REe1vvjRE1RE:1-205Ribosomal_L31 → 1.1 → 1.1.7
35RFe1vvjRF1RF:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
36RGe1vvjRG1RG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
37RHe1vvjRH1RH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
38RHe1vvjRH2RH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
39RIe1vvjRI1RI:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
40RIe1vvjRI2RI:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
41RNe1vvjRN1RN:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
42ROe1vvjRO1RO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
43RPe1vvjRP1RP:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
44RQe1vvjRQ1RQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
45RRe1vvjRR1RR:1-118Ribosomal_L17218 → 218.3 → 218.3.1
46RSe1vvjRS1RS:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
47RTe1vvjRT1RT:1-137Ribosomal_L194 → 4.1 → 4.1.1
48RUe1vvjRU1RU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
49RVe1vvjRV1RV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
50RWe1vvjRW1RW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
51RXe1vvjRX1RX:3-94Ribosomal_L23304 → 304.109 → 304.109.1
52RYe1vvjRY1RY:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
53RZe1vvjRZ1RZ:93-172Ribosomal_TL5_C240 → 240.1 → 240.1.1
54RZe1vvjRZ2RZ:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
55XBe1vvjXB1XB:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
56XCe1vvjXC1XC:2-105KH_2327 → 327.11 → 327.11.1
57XCe1vvjXC2XC:106-206Ribosomal_S3_C230 → 230.2 → 230.2.1
58XDe1vvjXD1XD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
59XEe1vvjXE1XE:5-73Ribosomal_S5330 → 330.1 → 330.1.1
60XEe1vvjXE2XE:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
61XFe1vvjXF1XF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
62XGe1vvjXG1XG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
63XHe1vvjXH1XH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
64XHe1vvjXH2XH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
65XIe1vvjXI1XI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
66XJe1vvjXJ1XJ:3-101Ribosomal_S10304 → 304.44 → 304.44.1
67XKe1vvjXK1XK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
68XLe1vvjXL1XL:5-129Ribosom_S12_S232 → 2.1 → 2.1.1
69XMe1vvjXM1XM:2-122Ribosomal_S13102 → 102.2 → 102.2.1
70XNe1vvjXN1XN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
71XOe1vvjXO1XO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
72XPe1vvjXP1XP:1-84Ribosomal_S16837 → 837.1 → 837.1.1
73XQe1vvjXQ1XQ:2-101Ribosomal_S172 → 2.1 → 2.1.1
74XRe1vvjXR1XR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
75XSe1vvjXS1XS:2-85Ribosomal_S19838 → 838.1 → 838.1.1
76XTe1vvjXT1XT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
77Y0e1vvjY01Y0:2-83Ribosomal_L27325 → 325.1 → 325.1.8
78Y1e1vvjY11Y1:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
79Y2e1vvjY21Y2:4-72Ribosomal_L29192 → 192.4 → 192.4.1
80Y3e1vvjY31Y3:2-60Ribosomal_L30887 → 887.1 → 887.1.1
81Y4e1vvjY41Y4:1-50Ribosomal_L314987 → 4987.1 → 4987.1.1
82Y5e1vvjY51Y5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
83Y6e1vvjY61Y6:5-53Ribosomal_L33375 → 375.1 → 375.1.1
84Y7e1vvjY71Y7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
85Y8e1vvjY81Y8:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
86YDe1vvjYD1YD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
87YDe1vvjYD2YD:2-126Ribosomal_L22 → 2.1 → 2.1.1
88YEe1vvjYE1YE:1-205Ribosomal_L31 → 1.1 → 1.1.7
89YFe1vvjYF1YF:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
90YGe1vvjYG1YG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
91YHe1vvjYH1YH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
92YHe1vvjYH2YH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
93YIe1vvjYI1YI:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
94YIe1vvjYI2YI:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
95YNe1vvjYN1YN:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
96YOe1vvjYO1YO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
97YPe1vvjYP1YP:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
98YQe1vvjYQ1YQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
99YRe1vvjYR1YR:1-118Ribosomal_L17218 → 218.3 → 218.3.1
100YSe1vvjYS1YS:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
101YTe1vvjYT1YT:1-137Ribosomal_L194 → 4.1 → 4.1.1
102YUe1vvjYU1YU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
103YVe1vvjYV1YV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
104YWe1vvjYW1YW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
105YXe1vvjYX1YX:3-94Ribosomal_L23304 → 304.109 → 304.109.1
106YYe1vvjYY1YY:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
107YZe1vvjYZ1YZ:93-172Ribosomal_TL5_C240 → 240.1 → 240.1.1
108YZe1vvjYZ2YZ:1-92Ribosomal_L25p239 → 239.1 → 239.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors