PDB 1VY5
X-RAY DIFFRACTION2.55 Å0 chains110 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain ABview chain
1 domainChain ACview chain
2 domainsChain ADview chain
1 domainChain AEview chain
2 domainsChain AFview chain
1 domainChain AGview chain
1 domainChain AHview chain
2 domainsChain AIview chain
1 domainChain AJview chain
1 domainChain AKview chain
1 domainChain ALview chain
1 domainChain AMview chain
1 domainChain ANview chain
1 domainChain AOview chain
1 domainChain APview chain
1 domainChain AQview chain
1 domainChain ARview chain
1 domainChain ASview chain
1 domainChain ATview chain
1 domainChain B0view chain
1 domainChain B1view chain
1 domainChain B2view chain
1 domainChain B3view chain
1 domainChain B4view chain
1 domainChain B5view chain
1 domainChain B6view chain
1 domainChain B7view chain
1 domainChain B8view chain
1 domainChain B9view chain
1 domainChain BDview chain
2 domainsChain BEview chain
1 domainChain BFview chain
1 domainChain BGview chain
1 domainChain BHview chain
2 domainsChain BIview chain
2 domainsChain BNview chain
1 domainChain BOview chain
1 domainChain BPview chain
1 domainChain BQview chain
1 domainChain BRview chain
1 domainChain BSview chain
1 domainChain BTview chain
1 domainChain BUview chain
1 domainChain BVview chain
1 domainChain BWview chain
1 domainChain BXview chain
1 domainChain BYview chain
1 domainChain BZview chain
2 domainsChain CBview chain
1 domainChain CCview chain
2 domainsChain CDview chain
1 domainChain CEview chain
2 domainsChain CFview chain
1 domainChain CGview chain
1 domainChain CHview chain
2 domainsChain CIview chain
1 domainChain CJview chain
1 domainChain CKview chain
1 domainChain CLview chain
1 domainChain CMview chain
1 domainChain CNview chain
1 domainChain COview chain
1 domainChain CPview chain
1 domainChain CQview chain
1 domainChain CRview chain
1 domainChain CSview chain
1 domainChain CTview chain
1 domainChain D0view chain
1 domainChain D1view chain
1 domainChain D2view chain
1 domainChain D3view chain
1 domainChain D4view chain
1 domainChain D5view chain
1 domainChain D6view chain
1 domainChain D7view chain
1 domainChain D8view chain
1 domainChain D9view chain
1 domainChain DDview chain
2 domainsChain DEview chain
1 domainChain DFview chain
1 domainChain DGview chain
1 domainChain DHview chain
2 domainsChain DIview chain
2 domainsChain DNview chain
1 domainChain DOview chain
1 domainChain DPview chain
1 domainChain DQview chain
1 domainChain DRview chain
1 domainChain DSview chain
1 domainChain DTview chain
1 domainChain DUview chain
1 domainChain DVview chain
1 domainChain DWview chain
1 domainChain DXview chain
1 domainChain DYview chain
1 domainChain DZview chain
2 domainsAll Domains (110)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AB | e1vy5AB1 | AB:7-127,AB:157-237 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | AC | e1vy5AC1 | AC:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 3 | AC | e1vy5AC2 | AC:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 4 | AD | e1vy5AD1 | AD:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 5 | AE | e1vy5AE1 | AE:73-152 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 6 | AE | e1vy5AE2 | AE:5-72 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 7 | AF | e1vy5AF1 | AF:1-100 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 8 | AG | e1vy5AG1 | AG:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 9 | AH | e1vy5AH1 | AH:2-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 10 | AH | e1vy5AH2 | AH:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 11 | AI | e1vy5AI1 | AI:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 12 | AJ | e1vy5AJ1 | AJ:4-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 13 | AK | e1vy5AK1 | AK:13-126 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 14 | AL | e1vy5AL1 | AL:5-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 15 | AM | e1vy5AM1 | AM:2-124 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 16 | AN | e1vy5AN1 | AN:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 17 | AO | e1vy5AO1 | AO:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 18 | AP | e1vy5AP1 | AP:1-82 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 19 | AQ | e1vy5AQ1 | AQ:2-78 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 20 | AR | e1vy5AR1 | AR:20-87 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 21 | AS | e1vy5AS1 | AS:2-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 22 | AT | e1vy5AT1 | AT:8-103 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 23 | B0 | e1vy5B01 | B0:2-84 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 24 | B1 | e1vy5B11 | B1:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 25 | B2 | e1vy5B21 | B2:1-70 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 26 | B3 | e1vy5B31 | B3:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 27 | B4 | e1vy5B41 | B4:1-69 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 28 | B5 | e1vy5B51 | B5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 29 | B6 | e1vy5B61 | B6:2-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 30 | B7 | e1vy5B71 | B7:1-48 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 31 | B8 | e1vy5B81 | B8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 32 | B9 | e1vy5B91 | B9:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 33 | BD | e1vy5BD1 | BD:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 34 | BD | e1vy5BD2 | BD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 35 | BE | e1vy5BE1 | BE:1-204 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 36 | BF | e1vy5BF1 | BF:6-208 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 37 | BG | e1vy5BG1 | BG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 38 | BH | e1vy5BH1 | BH:83-175 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 39 | BH | e1vy5BH2 | BH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 40 | BI | e1vy5BI1 | BI:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 41 | BI | e1vy5BI2 | BI:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 42 | BN | e1vy5BN1 | BN:1-140 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 43 | BO | e1vy5BO1 | BO:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 44 | BP | e1vy5BP1 | BP:1-149 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 45 | BQ | e1vy5BQ1 | BQ:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 46 | BR | e1vy5BR1 | BR:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 47 | BS | e1vy5BS1 | BS:3-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 48 | BT | e1vy5BT1 | BT:1-131 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 49 | BU | e1vy5BU1 | BU:2-117 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 50 | BV | e1vy5BV1 | BV:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 51 | BW | e1vy5BW1 | BW:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 52 | BX | e1vy5BX1 | BX:1-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 53 | BY | e1vy5BY1 | BY:1-107 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 54 | BZ | e1vy5BZ1 | BZ:93-171 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 55 | BZ | e1vy5BZ2 | BZ:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 56 | CB | e1vy5CB1 | CB:7-127,CB:157-237 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 57 | CC | e1vy5CC1 | CC:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 58 | CC | e1vy5CC2 | CC:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 59 | CD | e1vy5CD1 | CD:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 60 | CE | e1vy5CE1 | CE:73-152 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 61 | CE | e1vy5CE2 | CE:5-72 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 62 | CF | e1vy5CF1 | CF:1-100 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 63 | CG | e1vy5CG1 | CG:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 64 | CH | e1vy5CH1 | CH:2-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 65 | CH | e1vy5CH2 | CH:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 66 | CI | e1vy5CI1 | CI:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 67 | CJ | e1vy5CJ1 | CJ:5-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 68 | CK | e1vy5CK1 | CK:13-126 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 69 | CL | e1vy5CL1 | CL:5-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 70 | CM | e1vy5CM1 | CM:3-124 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 71 | CN | e1vy5CN1 | CN:2-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 72 | CO | e1vy5CO1 | CO:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 73 | CP | e1vy5CP1 | CP:1-82 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 74 | CQ | e1vy5CQ1 | CQ:2-78 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 75 | CR | e1vy5CR1 | CR:20-87 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 76 | CS | e1vy5CS1 | CS:2-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 77 | CT | e1vy5CT1 | CT:8-103 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 78 | D0 | e1vy5D01 | D0:2-84 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 79 | D1 | e1vy5D11 | D1:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 80 | D2 | e1vy5D21 | D2:1-70 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 81 | D3 | e1vy5D31 | D3:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 82 | D4 | e1vy5D41 | D4:1-69 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 83 | D5 | e1vy5D51 | D5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 84 | D6 | e1vy5D61 | D6:2-54 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 85 | D7 | e1vy5D71 | D7:1-48 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 86 | D8 | e1vy5D81 | D8:2-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 87 | D9 | e1vy5D91 | D9:1-37 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 88 | DD | e1vy5DD1 | DD:127-276 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 89 | DD | e1vy5DD2 | DD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 90 | DE | e1vy5DE1 | DE:1-204 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 91 | DF | e1vy5DF1 | DF:6-208 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 92 | DG | e1vy5DG1 | DG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 93 | DH | e1vy5DH1 | DH:83-175 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 94 | DH | e1vy5DH2 | DH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 95 | DI | e1vy5DI1 | DI:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 96 | DI | e1vy5DI2 | DI:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 97 | DN | e1vy5DN1 | DN:1-140 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 98 | DO | e1vy5DO1 | DO:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 99 | DP | e1vy5DP1 | DP:1-149 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 100 | DQ | e1vy5DQ1 | DQ:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 101 | DR | e1vy5DR1 | DR:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 102 | DS | e1vy5DS1 | DS:3-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 103 | DT | e1vy5DT1 | DT:1-131 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 104 | DU | e1vy5DU1 | DU:2-117 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 105 | DV | e1vy5DV1 | DV:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 106 | DW | e1vy5DW1 | DW:1-112 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 107 | DX | e1vy5DX1 | DX:1-95 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 108 | DY | e1vy5DY1 | DY:1-107 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 109 | DZ | e1vy5DZ1 | DZ:93-174 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 110 | DZ | e1vy5DZ2 | DZ:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors