ECODEvolutionary Classification of Protein Domains

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PDB 2BSD

X-RAY DIFFRACTION2.30 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e2bsdA1(A:162-264)e2bsdA2(A:2-140)e2bsdA3(A:141-161)e2bsdA4(A:129-149)

Chain Bview chain

4 domains

e2bsdB1(B:162-264)e2bsdB2(B:2-140)e2bsdB3(B:141-161)e2bsdB4(B:129-149)

Chain Cview chain

4 domains

e2bsdC1(C:162-264)e2bsdC2(C:2-140)e2bsdC3(C:141-161)e2bsdC4(C:129-149)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2bsdA1	A:162-264	Caudo_bapla_RBP	5092 → 5092.1 → 5092.1.1
2	A	e2bsdA2	A:2-140	Caudo_bapla_N	4166 → 4166.1 → 4166.1.1
3	A	e2bsdA3	A:141-161	Caudo_bapla_RBP_neck	79 → 79.1 → 79.1.1
4	A	e2bsdA4	A:129-149	79.1.1.0	79 → 79.1 → 79.1.1
5	B	e2bsdB1	B:162-264	Caudo_bapla_RBP	5092 → 5092.1 → 5092.1.1
6	B	e2bsdB2	B:2-140	Caudo_bapla_N	4166 → 4166.1 → 4166.1.1
7	B	e2bsdB3	B:141-161	Caudo_bapla_RBP_neck	79 → 79.1 → 79.1.1
8	B	e2bsdB4	B:129-149	79.1.1.0	79 → 79.1 → 79.1.1
9	C	e2bsdC1	C:162-264	Caudo_bapla_RBP	5092 → 5092.1 → 5092.1.1
10	C	e2bsdC2	C:2-140	Caudo_bapla_N	4166 → 4166.1 → 4166.1.1
11	C	e2bsdC3	C:141-161	RIG-I_C	3930 → 3930.1 → 3930.1.1
12	C	e2bsdC4	C:129-149	79.1.1.0	79 → 79.1 → 79.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors