Home/PDB

PDB 2JA7

X-RAY DIFFRACTION3.80 Å0 chains60 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (60)

#ChainDomain IDRangeFamilyClassification
1Ae2ja7A1A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
2Ae2ja7A2A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
3Ae2ja7A3A:1060-1102,A:1301-1455RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
4Ae2ja7A4A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
5Ae2ja7A5A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
6Ae2ja7A6A:2-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
7Ae2ja7A7A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
8Ae2ja7A8A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
9Ae2ja7A9A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
10Be2ja7B1B:18-70,B:90-133,B:164-218,B:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
11Be2ja7B2B:814-850,B:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
12Be2ja7B3B:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
13Be2ja7B4B:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
14Be2ja7B5B:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
15Be2ja7B6B:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
16Be2ja7B7B:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
17Ce2ja7C1C:3-37,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
18Ce2ja7C2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
19De2ja7D1D:4-71,D:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ee2ja7E1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
21Ee2ja7E2E:5-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
22Fe2ja7F1F:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
23Ge2ja7G1G:81-171S12 → 2.1 → 2.1.1
24Ge2ja7G2G:1-80SHS2_Rpb7-N872 → 872.1 → 872.1.1
25He2ja7H1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
26Ie2ja7I1I:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
27Ie2ja7I2I:50-117TFIIS_C375 → 375.1 → 375.1.1
28Je2ja7J1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
29Ke2ja7K1K:1-114RNA_pol_L_2305 → 305.1 → 305.1.1
30Le2ja7L1L:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
31Me2ja7M1M:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
32Me2ja7M2M:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
33Me2ja7M3M:1060-1102,M:1301-1455RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
34Me2ja7M4M:1103-1131,M:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
35Me2ja7M5M:337-374,M:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
36Me2ja7M6M:2-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
37Me2ja7M7M:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
38Me2ja7M8M:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
39Me2ja7M9M:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
40Ne2ja7N1N:542-630RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
41Ne2ja7N2N:1098-1224RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
42Ne2ja7N3N:219-404RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
43Ne2ja7N4N:18-70,N:90-133,N:164-218,N:405-541RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
44Ne2ja7N5N:851-974RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
45Ne2ja7N6N:814-850,N:975-1097RNA_pol_Rpb2_61 → 1.1 → 1.1.2
46Ne2ja7N7N:631-8134042.1.1.04042 → 4042.1 → 4042.1.1
47Oe2ja7O1O:3-37,O:173-268RNA_pol_L305 → 305.1 → 305.1.1
48Oe2ja7O2O:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
49Pe2ja7P1P:4-71,P:131-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
50Qe2ja7Q1Q:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
51Qe2ja7Q2Q:5-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
52Re2ja7R1R:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
53Se2ja7S1S:81-171S12 → 2.1 → 2.1.1
54Se2ja7S2S:1-80SHS2_Rpb7-N872 → 872.1 → 872.1.1
55Te2ja7T1T:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
56Ue2ja7U1U:2-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
57Ue2ja7U2U:50-117TFIIS_C375 → 375.1 → 375.1.1
58Ve2ja7V1V:1-65RNA_pol_N101 → 101.4 → 101.4.1
59We2ja7W1W:1-114RNA_pol_L_2305 → 305.1 → 305.1.1
60Xe2ja7X1X:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors