ECODEvolutionary Classification of Protein Domains

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PDB 2NUP

X-RAY DIFFRACTION2.60 Å0 chains11 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e2nupA1(A:123-393)e2nupA2(A:518-620)e2nupA3(A:621-723,A:746-764)e2nupA4(A:3-50,A:394-517)e2nupA5(A:51-122)

Chain Bview chain

5 domains

e2nupB1(B:346-415,B:744-838)e2nupB2(B:501-743)e2nupB3(B:944-1093)e2nupB4(B:416-500)e2nupB5(B:839-943)

Chain Cview chain

1 domain

e2nupC1(C:1-157)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2nupA1	A:123-393	Sec23_trunk	2006 → 2006.1 → 2006.1.6
2	A	e2nupA2	A:518-620	Sec23_helical	610 → 610.2 → 610.2.1
3	A	e2nupA3	A:621-723,A:746-764	Gelsolin	224 → 224.1 → 224.1.1
4	A	e2nupA4	A:3-50,A:394-517	Sec23_BS	11 → 11.1 → 11.1.5
5	A	e2nupA5	A:51-122	zf-Sec23_Sec24	375 → 375.1 → 375.1.1
6	B	e2nupB1	B:346-415,B:744-838	Sec23_BS	11 → 11.1 → 11.1.5
7	B	e2nupB2	B:501-743	Sec23_trunk	2006 → 2006.1 → 2006.1.6
8	B	e2nupB3	B:944-1093	Gelsolin	224 → 224.1 → 224.1.1
9	B	e2nupB4	B:416-500	zf-Sec23_Sec24	375 → 375.1 → 375.1.1
10	B	e2nupB5	B:839-943	Sec23_helical	610 → 610.2 → 610.2.1
11	C	e2nupC1	C:1-157	Longin	223 → 223.2 → 223.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors