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PDB 2PMZ

X-RAY DIFFRACTION3.40 Å0 chains48 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (48)

#ChainDomain IDRangeFamilyClassification
1Ae2pmzA1A:4-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
2Ae2pmzA2A:307-347,A:411-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
3Ae2pmzA3A:348-410RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
4Ae2pmzA4A:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
5Ae2pmzA5A:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
6Be2pmzB1B:473-572RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
7Be2pmzB2B:168-341RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
8Be2pmzB3B:713-749,B:873-995RNA_pol_Rpb2_61 → 1.1 → 1.1.2
9Be2pmzB4B:5-167,B:342-472RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
10Be2pmzB5B:996-1119RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
11Be2pmzB6B:750-872RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
12Be2pmzB7B:573-7124042.1.1.04042 → 4042.1 → 4042.1.1
13Ce2pmzC1C:66-146,C:238-395RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
14Ce2pmzC2C:11-654957.1.1.04957 → 4957.1 → 4957.1.1
15De2pmzD1D:2-36,D:159-265RNA_pol_L305 → 305.1 → 305.1.1
16De2pmzD2D:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
17Ee2pmzE1E:79-180S12 → 2.1 → 2.1.1
18Ee2pmzE2E:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
19Fe2pmzF1F:1-89RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ge2pmzG1G:66-146,G:238-395RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
21Ge2pmzG2G:11-654957.1.1.04957 → 4957.1 → 4957.1.1
22He2pmzH1H:9-82RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
23Ke2pmzK1K:11-92RNA_pol_Rpb6152 → 152.1 → 152.1.1
24Le2pmzL1L:1-92RNA_pol_L_2305 → 305.1 → 305.1.1
25Ne2pmzN1N:1-64RNA_pol_N101 → 101.4 → 101.4.1
26Pe2pmzP1P:6-48375.1.1.0375 → 375.1 → 375.1.1
27Qe2pmzQ1Q:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
28Qe2pmzQ2Q:348-410RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
29Qe2pmzQ3Q:4-96,Q:174-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
30Qe2pmzQ4Q:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
31Qe2pmzQ5Q:307-347,Q:411-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
32Re2pmzR1R:473-572RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
33Re2pmzR2R:573-7124042.1.1.04042 → 4042.1 → 4042.1.1
34Re2pmzR3R:168-341RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
35Re2pmzR4R:713-749,R:873-995RNA_pol_Rpb2_61 → 1.1 → 1.1.2
36Re2pmzR5R:996-1119RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
37Re2pmzR6R:5-167,R:342-472RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
38Re2pmzR7R:750-872RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
39Se2pmzS1S:2-36,S:159-265RNA_pol_L305 → 305.1 → 305.1.1
40Se2pmzS2S:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
41Te2pmzT1T:79-180S12 → 2.1 → 2.1.1
42Te2pmzT2T:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
43Ue2pmzU1U:1-89RNA_pol_Rpb4102 → 102.1 → 102.1.1
44Ve2pmzV1V:9-82RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
45We2pmzW1W:11-92RNA_pol_Rpb6152 → 152.1 → 152.1.1
46Xe2pmzX1X:1-92RNA_pol_L_2305 → 305.1 → 305.1.1
47Ye2pmzY1Y:1-64RNA_pol_N101 → 101.4 → 101.4.1
48Ze2pmzZ1Z:6-48375.1.1.0375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors