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PDB 2PPB

X-RAY DIFFRACTION3.00 Å0 chains43 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (43)

#ChainDomain IDRangeFamilyClassification
1Ae2ppbA1A:1-49,A:173-229RNA_pol_L305 → 305.1 → 305.1.1
2Ae2ppbA2A:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
3Be2ppbB1B:1-49,B:173-229RNA_pol_L305 → 305.1 → 305.1.1
4Be2ppbB2B:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
5Ce2ppbC4C:1-141,C:331-456RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
6Ce2ppbC5C:142-330RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
7Ce2ppbC7C:999-11184043.1.1.04043 → 4043.1 → 4043.1.1
8Ce2ppbC6C:458-591RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
9Ce2ppbC2C:592-662325.1.7.0325 → 325.1 → 325.1.7
10Ce2ppbC8C:699-832RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
11Ce2ppbC9C:664-700,C:827-999RNA_pol_Rpb2_61 → 1.1 → 1.1.2
12De2ppbD1D:166-207,D:391-396325.1.7.0325 → 325.1 → 325.1.7
13De2ppbD2D:1270-1330325.1.7.0325 → 325.1 → 325.1.7
14De2ppbD3D:2-165,D:449-6224246.1.1.04246 → 4246.1 → 4246.1.1
15De2ppbD4D:1201-1269,D:1331-1505RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
16De2ppbD5D:949-1109RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
17De2ppbD6D:778-948RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
18De2ppbD7D:397-448325.1.7.0325 → 325.1 → 325.1.7
19De2ppbD8D:1110-1200275.1.1.0275 → 275.1 → 275.1.1
20De2ppbD9D:610-653,D:697-777RNA_pol_Rpb1_21 → 1.1 → 1.1.2
21De2ppbD10D:654-6964951.1.1.04951 → 4951.1 → 4951.1.1
22Ee2ppbE1E:2-96RNA_pol_Rpb6152 → 152.1 → 152.1.2
23Ke2ppbK1K:1-49,K:173-229RNA_pol_L305 → 305.1 → 305.1.1
24Ke2ppbK2K:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
25Le2ppbL1L:1-49,L:173-229RNA_pol_L305 → 305.1 → 305.1.1
26Le2ppbL2L:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
27Me2ppbM4M:1-141,M:331-456RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
28Me2ppbM5M:142-330RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
29Me2ppbM7M:999-11184043.1.1.04043 → 4043.1 → 4043.1.1
30Me2ppbM6M:458-591RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
31Me2ppbM2M:592-662325.1.7.0325 → 325.1 → 325.1.7
32Me2ppbM8M:699-832RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
33Me2ppbM9M:664-700,M:827-999RNA_pol_Rpb2_61 → 1.1 → 1.1.2
34Ne2ppbN2N:610-653,N:697-777RNA_pol_Rpb1_21 → 1.1 → 1.1.2
35Ne2ppbN4N:654-6964951.1.1.04951 → 4951.1 → 4951.1.1
36Ne2ppbN35N:778-948RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
37Ne2ppbN37N:2-165,N:449-622RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
38Ne2ppbN38N:397-448325.1.7.0325 → 325.1 → 325.1.7
39Ne2ppbN39N:166-207,N:391-396325.1.7.0325 → 325.1 → 325.1.7
40Ne2ppbN40N:1110-1200275.1.1.0275 → 275.1 → 275.1.1
41Ne2ppbN41N:949-1109RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
42Ne2ppbN42N:1201-1251,N:1313-1505RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
43Oe2ppbO1O:2-96RNA_pol_Rpb6152 → 152.1 → 152.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors