PDB 2WB1
X-RAY DIFFRACTION3.52 Å0 chains54 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainsChain Cview chain
4 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
1 domainChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
7 domainsChain Sview chain
2 domainsChain Tview chain
2 domainsChain Uview chain
1 domainChain Vview chain
1 domainChain Xview chain
1 domainChain Yview chain
4 domainsChain Zview chain
1 domainAll Domains (54)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e2wb1A1 | A:645-879 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 2 | A | e2wb1A2 | A:4-306 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e2wb1A3 | A:495-644 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 4 | A | e2wb1A4 | A:307-494 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | B | e2wb1B1 | B:999-1122 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 6 | B | e2wb1B2 | B:753-875 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 7 | B | e2wb1B3 | B:576-715 | RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 8 | B | e2wb1B4 | B:476-575 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 9 | B | e2wb1B5 | B:171-344 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 10 | B | e2wb1B6 | B:8-170,B:345-475 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e2wb1B7 | B:716-752,B:876-998 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 12 | C | e2wb1C1 | C:11-65 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 13 | C | e2wb1C2 | C:148-232 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 14 | C | e2wb1C3 | C:116-147,C:233-275 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 15 | C | e2wb1C4 | C:66-115,C:276-394 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 16 | D | e2wb1D1 | D:37-158 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 17 | D | e2wb1D2 | D:2-36,D:159-264 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | E | e2wb1E1 | E:79-177 | S1 | 2 → 2.1 → 2.1.1 |
| 19 | E | e2wb1E2 | E:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 20 | F | e2wb1F1 | F:3-93 | 102.1.1.0 | 102 → 102.1 → 102.1.1 |
| 21 | G | e2wb1G1 | G:5-117 | RNA_pol_RpbG | 2 → 2.1 → 2.1.1 |
| 22 | H | e2wb1H1 | H:9-82 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 23 | I | e2wb1I1 | I:11-92 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 24 | J | e2wb1J1 | J:45-77 | RNA_pol_Rpo13 | 4146 → 4146.1 → 4146.1.1 |
| 25 | K | e2wb1K1 | K:11-92 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 26 | L | e2wb1L1 | L:1-92 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 27 | M | e2wb1M1 | M:1-92 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 28 | N | e2wb1N1 | N:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | O | e2wb1O1 | O:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 30 | P | e2wb1P1 | P:6-48 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 31 | Q | e2wb1Q1 | Q:45-77 | RNA_pol_Rpo13 | 4146 → 4146.1 → 4146.1.1 |
| 32 | R | e2wb1R1 | R:999-1122 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 33 | R | e2wb1R2 | R:716-752,R:876-998 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 34 | R | e2wb1R3 | R:171-344 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 35 | R | e2wb1R4 | R:8-170,R:345-475 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 36 | R | e2wb1R5 | R:476-575 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 37 | R | e2wb1R6 | R:576-715 | RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 38 | R | e2wb1R7 | R:753-875 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 39 | S | e2wb1S1 | S:37-158 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 40 | S | e2wb1S2 | S:2-36,S:159-264 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 41 | T | e2wb1T1 | T:79-177 | S1 | 2 → 2.1 → 2.1.1 |
| 42 | T | e2wb1T2 | T:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 43 | U | e2wb1U1 | U:3-93 | 102.1.1.0 | 102 → 102.1 → 102.1.1 |
| 44 | V | e2wb1V1 | V:5-117 | RNA_pol_RpbG | 2 → 2.1 → 2.1.1 |
| 45 | W | e2wb1W1 | W:645-879 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 46 | W | e2wb1W2 | W:307-494 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 47 | W | e2wb1W3 | W:4-306 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 48 | W | e2wb1W4 | W:495-644 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 49 | X | e2wb1X1 | X:6-48 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 50 | Y | e2wb1Y1 | Y:66-115,Y:276-394 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 51 | Y | e2wb1Y2 | Y:116-147,Y:233-275 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 52 | Y | e2wb1Y3 | Y:11-65 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 53 | Y | e2wb1Y4 | Y:148-232 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 54 | Z | e2wb1Z1 | Z:9-82 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors