PDB 3AOH
X-RAY DIFFRACTION4.10 Å0 chains71 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
10 domainsChain Eview chain
1 domainChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
7 domainsChain Iview chain
9 domainsChain Jview chain
1 domainChain Kview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
7 domainsChain Nview chain
10 domainsChain Oview chain
1 domainChain Xview chain
2 domainsChain Yview chain
2 domainsChain Zview chain
2 domainsAll Domains (71)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e3aohA1 | A:7-49,A:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e3aohA2 | A:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e3aohB1 | B:7-49,B:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 4 | B | e3aohB2 | B:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 5 | C | e3aohC4 | C:1-141,C:331-456 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 6 | C | e3aohC5 | C:142-330 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e3aohC7 | C:999-1112 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e3aohC6 | C:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 9 | C | e3aohC8 | C:592-664 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 10 | C | e3aohC9 | C:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | C | e3aohC10 | C:664-700,C:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 12 | D | e3aohD1 | D:395-448 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | D | e3aohD2 | D:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 14 | D | e3aohD3 | D:166-216,D:364-394 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 15 | D | e3aohD4 | D:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 16 | D | e3aohD5 | D:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 17 | D | e3aohD6 | D:2-165,D:449-610 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 18 | D | e3aohD7 | D:1201-1269,D:1331-1499 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 19 | D | e3aohD8 | D:611-653,D:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 20 | D | e3aohD9 | D:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 21 | D | e3aohD10 | D:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 22 | E | e3aohE1 | E:2-94 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 23 | F | e3aohF1 | F:8-49,F:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 24 | F | e3aohF2 | F:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 25 | G | e3aohG1 | G:7-49,G:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 26 | G | e3aohG2 | G:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 27 | H | e3aohH8 | H:1-142,H:332-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 28 | H | e3aohH9 | H:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 29 | H | e3aohH10 | H:143-331 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 30 | H | e3aohH13 | H:1000-1111 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 31 | H | e3aohH14 | H:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 32 | H | e3aohH6 | H:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 33 | H | e3aohH7 | H:664-700,H:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 34 | I | e3aohI4 | I:166-206,I:394-396 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 35 | I | e3aohI5 | I:397-448 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 36 | I | e3aohI11 | I:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 37 | I | e3aohI12 | I:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 38 | I | e3aohI14 | I:2-165,I:449-622 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 39 | I | e3aohI15 | I:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 40 | I | e3aohI16 | I:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 41 | I | e3aohI17 | I:1201-1251,I:1313-1501 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 42 | I | e3aohI18 | I:610-653,I:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 43 | J | e3aohJ1 | J:3-94 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 44 | K | e3aohK1 | K:8-49,K:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 45 | K | e3aohK2 | K:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 46 | L | e3aohL1 | L:7-49,L:173-229 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 47 | L | e3aohL2 | L:50-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 48 | M | e3aohM8 | M:1-142,M:332-457 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 49 | M | e3aohM9 | M:592-662 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 50 | M | e3aohM10 | M:143-331 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 51 | M | e3aohM13 | M:1000-1112 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 52 | M | e3aohM14 | M:458-591 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 53 | M | e3aohM6 | M:699-832 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 54 | M | e3aohM7 | M:664-700,M:827-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 55 | N | e3aohN1 | N:1270-1330 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 56 | N | e3aohN2 | N:395-448 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 57 | N | e3aohN3 | N:1110-1200 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 58 | N | e3aohN4 | N:949-1109 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 59 | N | e3aohN5 | N:611-653,N:697-777 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 60 | N | e3aohN6 | N:166-215,N:364-394 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 61 | N | e3aohN7 | N:1201-1269,N:1331-1502 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 62 | N | e3aohN8 | N:2-165,N:449-610 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 63 | N | e3aohN9 | N:654-696 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 64 | N | e3aohN10 | N:778-948 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 65 | O | e3aohO1 | O:2-94 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 66 | X | e3aohX1 | X:5-77 | GreA_GreB_N | 192 → 192.1 → 192.1.1 |
| 67 | X | e3aohX2 | X:78-156 | GreA_GreB | 284 → 284.1 → 284.1.1 |
| 68 | Y | e3aohY1 | Y:5-77 | GreA_GreB_N | 192 → 192.1 → 192.1.1 |
| 69 | Y | e3aohY2 | Y:78-156 | GreA_GreB | 284 → 284.1 → 284.1.1 |
| 70 | Z | e3aohZ1 | Z:5-77 | GreA_GreB_N | 192 → 192.1 → 192.1.1 |
| 71 | Z | e3aohZ2 | Z:78-156 | GreA_GreB | 284 → 284.1 → 284.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors