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PDB 3DXJ

X-RAY DIFFRACTION3.00 Å0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (54)

#ChainDomain IDRangeFamilyClassification
1Ae3dxjA1A:1-49,A:173-231RNA_pol_L305 → 305.1 → 305.1.1
2Ae3dxjA2A:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
3Be3dxjB1B:1-49,B:173-243RNA_pol_L305 → 305.1 → 305.1.1
4Be3dxjB2B:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
5Ce3dxjC4C:1-141,C:331-456RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
6Ce3dxjC5C:142-330RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
7Ce3dxjC7C:999-11184043.1.1.04043 → 4043.1 → 4043.1.1
8Ce3dxjC6C:458-591RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
9Ce3dxjC2C:592-662325.1.7.0325 → 325.1 → 325.1.7
10Ce3dxjC8C:699-832RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
11Ce3dxjC9C:664-700,C:827-999RNA_pol_Rpb2_61 → 1.1 → 1.1.2
12De3dxjD1D:208-215,D:341-389325.1.7.0325 → 325.1 → 325.1.7
13De3dxjD2D:610-653,D:697-777RNA_pol_Rpb1_21 → 1.1 → 1.1.2
14De3dxjD3D:1270-1330325.1.7.0325 → 325.1 → 325.1.7
15De3dxjD4D:2-165,D:449-609RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
16De3dxjD5D:949-1109RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
17De3dxjD6D:166-207,D:390-395325.1.7.0325 → 325.1 → 325.1.7
18De3dxjD7D:778-948RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
19De3dxjD8D:654-6964951.1.1.04951 → 4951.1 → 4951.1.1
20De3dxjD9D:396-448325.1.7.0325 → 325.1 → 325.1.7
21De3dxjD10D:216-340RPOC_hybrid325 → 325.1 → 325.1.6
22De3dxjD11D:1201-1269,D:1331-1505RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
23De3dxjD12D:1110-1200275.1.1.0275 → 275.1 → 275.1.1
24Ee3dxjE1E:2-96RNA_pol_Rpb6152 → 152.1 → 152.1.2
25Fe3dxjF3F:74-257Sigma70_r1_2,Sigma70_r2142 → 142.1 → 142.1.1
26Fe3dxjF4F:318-422Sigma70_r4101 → 101.1 → 101.1.1
27Fe3dxjF5F:258-317Sigma70_r3101 → 101.1 → 101.1.1
28Ke3dxjK1K:1-49,K:173-231RNA_pol_L305 → 305.1 → 305.1.1
29Ke3dxjK2K:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
30Le3dxjL2L:50-172RNA_pol_A_bac240 → 240.2 → 240.2.1
31Le3dxjL3L:1-49,L:173-243RNA_pol_L305 → 305.1 → 305.1.1
32Me3dxjM4M:1-141,M:331-456RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
33Me3dxjM5M:142-330RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
34Me3dxjM7M:999-11184043.1.1.04043 → 4043.1 → 4043.1.1
35Me3dxjM6M:458-591RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
36Me3dxjM2M:592-662325.1.7.0325 → 325.1 → 325.1.7
37Me3dxjM8M:699-832RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
38Me3dxjM9M:664-700,M:827-999RNA_pol_Rpb2_61 → 1.1 → 1.1.2
39Ne3dxjN12N:1110-1200275.1.1.0275 → 275.1 → 275.1.1
40Ne3dxjN5N:1270-1330325.1.7.0325 → 325.1 → 325.1.7
41Ne3dxjN6N:166-207,N:390-395325.1.7.0325 → 325.1 → 325.1.7
42Ne3dxjN7N:208-215,N:341-389325.1.7.0325 → 325.1 → 325.1.7
43Ne3dxjN3N:216-340RPOC_hybrid325 → 325.1 → 325.1.6
44Ne3dxjN8N:396-448325.1.7.0325 → 325.1 → 325.1.7
45Ne3dxjN2N:654-6964951.1.1.04951 → 4951.1 → 4951.1.1
46Ne3dxjN13N:778-948RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
47Ne3dxjN9N:1201-1269,N:1331-1505RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
48Ne3dxjN4N:949-1109RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
49Ne3dxjN1N:610-653,N:697-777RNA_pol_Rpb1_21 → 1.1 → 1.1.2
50Ne3dxjN10N:2-165,N:449-609RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
51Oe3dxjO1O:2-96RNA_pol_Rpb6152 → 152.1 → 152.1.2
52Pe3dxjP3P:74-257Sigma70_r1_2,Sigma70_r2142 → 142.1 → 142.1.1
53Pe3dxjP4P:318-422Sigma70_r4101 → 101.1 → 101.1.1
54Pe3dxjP5P:258-317Sigma70_r3101 → 101.1 → 101.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors