PDB 3F9K
X-RAY DIFFRACTION3.20 Å0 chains60 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
2 domainsChain Bview chain
2 domainsChain cview chain
2 domainsChain Cview chain
1 domainChain dview chain
2 domainsChain eview chain
1 domainChain Eview chain
2 domainsChain Fview chain
2 domainsChain gview chain
2 domainsChain Gview chain
1 domainChain hview chain
2 domainsChain iview chain
1 domainChain Iview chain
2 domainsChain Jview chain
2 domainsChain kview chain
2 domainsChain Kview chain
1 domainChain lview chain
2 domainsChain mview chain
1 domainChain Mview chain
2 domainsChain Nview chain
2 domainsChain oview chain
2 domainsChain Oview chain
1 domainChain pview chain
2 domainsChain qview chain
1 domainChain Qview chain
2 domainsChain Rview chain
2 domainsChain sview chain
2 domainsChain Sview chain
1 domainChain tview chain
2 domainsChain uview chain
1 domainChain Uview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
1 domainChain Yview chain
2 domainsChain Zview chain
2 domainsAll Domains (60)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e3f9ka1 | a:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 2 | A | e3f9kA1 | A:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 3 | A | e3f9kA2 | A:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 4 | B | e3f9kB1 | B:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 5 | B | e3f9kB2 | B:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 6 | c | e3f9kc1 | c:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 7 | c | e3f9kc2 | c:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 8 | C | e3f9kC1 | C:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 9 | d | e3f9kd1 | d:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 10 | d | e3f9kd2 | d:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 11 | e | e3f9ke1 | e:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 12 | E | e3f9kE1 | E:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 13 | E | e3f9kE2 | E:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 14 | F | e3f9kF1 | F:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 15 | F | e3f9kF2 | F:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 16 | g | e3f9kg1 | g:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 17 | g | e3f9kg2 | g:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 18 | G | e3f9kG1 | G:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 19 | h | e3f9kh1 | h:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 20 | h | e3f9kh2 | h:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 21 | i | e3f9ki1 | i:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 22 | I | e3f9kI1 | I:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 23 | I | e3f9kI2 | I:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 24 | J | e3f9kJ1 | J:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 25 | J | e3f9kJ2 | J:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 26 | k | e3f9kk1 | k:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 27 | k | e3f9kk2 | k:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 28 | K | e3f9kK1 | K:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 29 | l | e3f9kl1 | l:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 30 | l | e3f9kl2 | l:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 31 | m | e3f9km1 | m:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 32 | M | e3f9kM1 | M:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 33 | M | e3f9kM2 | M:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 34 | N | e3f9kN1 | N:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 35 | N | e3f9kN2 | N:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 36 | o | e3f9ko1 | o:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 37 | o | e3f9ko2 | o:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 38 | O | e3f9kO1 | O:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 39 | p | e3f9kp1 | p:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 40 | p | e3f9kp2 | p:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 41 | q | e3f9kq1 | q:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 42 | Q | e3f9kQ1 | Q:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 43 | Q | e3f9kQ2 | Q:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 44 | R | e3f9kR1 | R:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 45 | R | e3f9kR2 | R:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 46 | s | e3f9ks1 | s:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 47 | s | e3f9ks2 | s:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 48 | S | e3f9kS1 | S:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 49 | t | e3f9kt1 | t:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 50 | t | e3f9kt2 | t:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 51 | u | e3f9ku1 | u:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 52 | U | e3f9kU1 | U:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 53 | U | e3f9kU2 | U:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 54 | V | e3f9kV1 | V:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 55 | V | e3f9kV2 | V:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
| 56 | W | e3f9kW1 | W:347-435 | LEDGF | 611 → 611.3 → 611.3.1 |
| 57 | Y | e3f9kY1 | Y:4-46 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 58 | Y | e3f9kY2 | Y:47-207 | rve | 2484 → 2484.1 → 2484.1.1 |
| 59 | Z | e3f9kZ1 | Z:1-43 | Integrase_Zn | 101 → 101.1 → 101.1.1 |
| 60 | Z | e3f9kZ2 | Z:54-206 | rve | 2484 → 2484.1 → 2484.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors