PDB 3H0G
X-RAY DIFFRACTION3.65 Å0 chains59 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
8 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
9 domainsChain Nview chain
7 domainsChain Oview chain
2 domainsChain Pview chain
1 domainChain Qview chain
2 domainsChain Rview chain
1 domainChain Sview chain
2 domainsChain Tview chain
1 domainChain Uview chain
2 domainsChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainAll Domains (59)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e3h0gA5 | A:1063-1116,A:1338-1456 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 2 | A | e3h0gA2 | A:2-342 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e3h0gA3 | A:669-877 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 4 | A | e3h0gA4 | A:878-1062 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 5 | A | e3h0gA6 | A:526-668 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e3h0gA7 | A:1145-1278 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 7 | A | e3h0gA8 | A:340-525 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 8 | A | e3h0gA9 | A:1272-1337 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | B | e3h0gB1 | B:10-57,B:77-121,B:149-203,B:391-527 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | B | e3h0gB2 | B:204-390 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | B | e3h0gB3 | B:617-802 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 12 | B | e3h0gB4 | B:1087-1210 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 13 | B | e3h0gB5 | B:840-963 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 14 | B | e3h0gB6 | B:528-616 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e3h0gB7 | B:803-839,B:964-1086 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | C | e3h0gC3 | C:4-40,C:174-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 17 | C | e3h0gC4 | C:41-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | D | e3h0gD1 | D:6-135 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 19 | E | e3h0gE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 20 | E | e3h0gE2 | E:4-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | F | e3h0gF1 | F:60-142 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 22 | G | e3h0gG3 | G:70-172 | S1 | 2 → 2.1 → 2.1.1 |
| 23 | G | e3h0gG4 | G:3-69 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 24 | H | e3h0gH1 | H:2-125 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 25 | I | e3h0gI3 | I:3-50 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 26 | I | e3h0gI4 | I:51-113 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 27 | J | e3h0gJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 28 | K | e3h0gK1 | K:1-119 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 29 | L | e3h0gL1 | L:19-63 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 30 | M | e3h0gM1 | M:381-441 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 31 | M | e3h0gM2 | M:878-1062 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 32 | M | e3h0gM3 | M:1063-1115,M:1337-1459,M:1491-1508 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 33 | M | e3h0gM4 | M:1116-1144,M:1279-1336 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 34 | M | e3h0gM5 | M:343-380,M:442-525 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 35 | M | e3h0gM6 | M:2-342 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 36 | M | e3h0gM7 | M:669-877 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 37 | M | e3h0gM8 | M:1145-1278 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 38 | M | e3h0gM9 | M:526-668 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 39 | N | e3h0gN1 | N:528-616 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 40 | N | e3h0gN2 | N:840-963 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 41 | N | e3h0gN3 | N:204-390 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 42 | N | e3h0gN4 | N:1087-1210 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 43 | N | e3h0gN5 | N:803-839,N:964-1086 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 44 | N | e3h0gN6 | N:10-57,N:77-121,N:149-203,N:391-527 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 45 | N | e3h0gN7 | N:617-802 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 46 | O | e3h0gO1 | O:4-36,O:174-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 47 | O | e3h0gO2 | O:37-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 48 | P | e3h0gP1 | P:6-135 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 49 | Q | e3h0gQ1 | Q:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 50 | Q | e3h0gQ2 | Q:4-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 51 | R | e3h0gR1 | R:60-142 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 52 | S | e3h0gS3 | S:70-172 | S1 | 2 → 2.1 → 2.1.1 |
| 53 | S | e3h0gS4 | S:3-69 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 54 | T | e3h0gT1 | T:2-125 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 55 | U | e3h0gU3 | U:3-50 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 56 | U | e3h0gU4 | U:51-113 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 57 | V | e3h0gV1 | V:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 58 | W | e3h0gW1 | W:1-119 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 59 | X | e3h0gX1 | X:19-63 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors