PDB 3H3V
X-RAY DIFFRACTION4.00 Å0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
9 domainsChain Cview chain
7 domainsChain Dview chain
2 domainsChain Eview chain
1 domainChain Fview chain
2 domainsChain Gview chain
1 domainChain Hview chain
2 domainsChain Iview chain
1 domainChain Jview chain
2 domainsChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e3h3vB1 | B:1060-1102,B:1301-1455 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 2 | B | e3h3vB2 | B:375-435 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 3 | B | e3h3vB3 | B:663-871 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 4 | B | e3h3vB4 | B:2-336 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 5 | B | e3h3vB5 | B:337-374,B:436-519 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | B | e3h3vB6 | B:1103-1131,B:1243-1300 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 7 | B | e3h3vB7 | B:872-1059 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | B | e3h3vB8 | B:1132-1242 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 9 | B | e3h3vB9 | B:520-662 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 10 | C | e3h3vC1 | C:1098-1224 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | C | e3h3vC2 | C:542-630 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 12 | C | e3h3vC3 | C:20-70,C:90-134,C:164-218,C:405-541 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | C | e3h3vC4 | C:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 14 | C | e3h3vC5 | C:814-850,C:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | C | e3h3vC6 | C:631-813 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 16 | C | e3h3vC7 | C:219-404 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 17 | D | e3h3vD3 | D:3-41,D:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | D | e3h3vD4 | D:42-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | E | e3h3vE1 | E:4-71,E:131-221 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | F | e3h3vF1 | F:143-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | F | e3h3vF2 | F:2-142 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | G | e3h3vG1 | G:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | H | e3h3vH3 | H:69-171 | S1 | 2 → 2.1 → 2.1.1 |
| 24 | H | e3h3vH4 | H:1-68 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | I | e3h3vI1 | I:2-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | J | e3h3vJ1 | J:2-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | J | e3h3vJ2 | J:50-120 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | K | e3h3vK1 | K:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | L | e3h3vL1 | L:1-114 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | M | e3h3vM1 | M:25-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors