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PDB 3HKZ

X-RAY DIFFRACTION3.40 Å0 chains54 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (54)

#ChainDomain IDRangeFamilyClassification
1Ae3hkzA1A:307-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
2Ae3hkzA2A:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
3Ae3hkzA3A:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
4Ae3hkzA4A:4-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
5Be3hkzB1B:750-872RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
6Be3hkzB2B:168-341RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
7Be3hkzB3B:713-749,B:873-995RNA_pol_Rpb2_61 → 1.1 → 1.1.2
8Be3hkzB4B:573-7124042.1.1.04042 → 4042.1 → 4042.1.1
9Be3hkzB5B:996-1119RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
10Be3hkzB6B:473-572RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
11Be3hkzB7B:5-167,B:342-472RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
12Ce3hkzC1C:11-654957.1.1.04957 → 4957.1 → 4957.1.1
13Ce3hkzC2C:66-115,C:276-395RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
14Ce3hkzC3C:116-147,C:233-2754956.1.1.04956 → 4956.1 → 4956.1.1
15Ce3hkzC4C:148-2324955.1.1.04955 → 4955.1 → 4955.1.1
16De3hkzD1D:2-36,D:159-265RNA_pol_L305 → 305.1 → 305.1.1
17De3hkzD2D:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
18Ee3hkzE1E:79-180S12 → 2.1 → 2.1.1
19Ee3hkzE2E:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
20Fe3hkzF1F:1-89RNA_pol_Rpb4102 → 102.1 → 102.1.1
21Ge3hkzG1G:5-117RNA_pol_RpbG2 → 2.1 → 2.1.1
22He3hkzH1H:9-82RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
23Ie3hkzI1I:495-644RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
24Ie3hkzI2I:645-879RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
25Ie3hkzI3I:4-306RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
26Ie3hkzI4I:307-494RNA_pol_Rpb1_21 → 1.1 → 1.1.2
27Je3hkzJ1J:713-749,J:873-995RNA_pol_Rpb2_61 → 1.1 → 1.1.2
28Je3hkzJ2J:996-1119RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
29Je3hkzJ3J:750-872RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
30Je3hkzJ4J:5-167,J:342-472RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
31Je3hkzJ5J:473-572RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
32Je3hkzJ6J:573-7124042.1.1.04042 → 4042.1 → 4042.1.1
33Je3hkzJ7J:168-341RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
34Ke3hkzK1K:11-92RNA_pol_Rpb6152 → 152.1 → 152.1.1
35Le3hkzL1L:1-92RNA_pol_L_2305 → 305.1 → 305.1.1
36Me3hkzM1M:148-2324955.1.1.04955 → 4955.1 → 4955.1.1
37Me3hkzM2M:116-147,M:233-2754956.1.1.04956 → 4956.1 → 4956.1.1
38Me3hkzM3M:11-654957.1.1.04957 → 4957.1 → 4957.1.1
39Me3hkzM4M:66-115,M:276-395RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
40Ne3hkzN1N:1-64RNA_pol_N101 → 101.4 → 101.4.1
41Oe3hkzO1O:37-158RNA_pol_A_bac240 → 240.2 → 240.2.1
42Oe3hkzO2O:2-36,O:159-265RNA_pol_L305 → 305.1 → 305.1.1
43Pe3hkzP1P:6-48375.1.1.0375 → 375.1 → 375.1.1
44Qe3hkzQ1Q:79-180S12 → 2.1 → 2.1.1
45Qe3hkzQ2Q:1-78SHS2_Rpb7-N872 → 872.1 → 872.1.1
46Re3hkzR1R:1-89RNA_pol_Rpb4102 → 102.1 → 102.1.1
47Se3hkzS1S:5-117RNA_pol_RpbG2 → 2.1 → 2.1.1
48Te3hkzT1T:9-82RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
49Ue3hkzU1U:11-92RNA_pol_Rpb6152 → 152.1 → 152.1.1
50Ve3hkzV1V:1-92RNA_pol_L_2305 → 305.1 → 305.1.1
51We3hkzW1W:1-64RNA_pol_N101 → 101.4 → 101.4.1
52Xe3hkzX1X:6-48375.1.1.0375 → 375.1 → 375.1.1
53Ye3hkzY1Y:38-82RNA_pol_Rpo134146 → 4146.1 → 4146.1.1
54Ze3hkzZ1Z:38-82RNA_pol_Rpo134146 → 4146.1 → 4146.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors