ECODEvolutionary Classification of Protein Domains

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PDB 3JCL

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e3jclA1(A:15-301)e3jclA2(A:322-569)e3jclA3(A:302-321,A:570-730)e3jclA4(A:731-1118)

Chain Bview chain

4 domains

e3jclB1(B:322-569)e3jclB2(B:15-301)e3jclB3(B:302-321,B:570-730)e3jclB4(B:731-826,B:864-1118)

Chain Cview chain

4 domains

e3jclC1(C:302-321,C:570-730)e3jclC2(C:731-826,C:864-1118)e3jclC3(C:15-301)e3jclC4(C:322-569)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3jclA1	A:15-301	bCoV_S1_N	10 → 10.1 → 10.1.1
2	A	e3jclA2	A:322-569	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
3	A	e3jclA3	A:302-321,A:570-730	CoV_S1_C	1043 → 1043.1 → 1043.1.1
4	A	e3jclA4	A:731-1118	CoV_S2	1042 → 1042.1 → 1042.1.1
5	B	e3jclB1	B:322-569	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
6	B	e3jclB2	B:15-301	bCoV_S1_N	10 → 10.1 → 10.1.1
7	B	e3jclB3	B:302-321,B:570-730	CoV_S1_C	1043 → 1043.1 → 1043.1.1
8	B	e3jclB4	B:731-826,B:864-1118	CoV_S2	1042 → 1042.1 → 1042.1.1
9	C	e3jclC1	C:302-321,C:570-730	CoV_S1_C	1043 → 1043.1 → 1043.1.1
10	C	e3jclC2	C:731-826,C:864-1118	CoV_S2	1042 → 1042.1 → 1042.1.1
11	C	e3jclC3	C:15-301	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e3jclC4	C:322-569	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors