PDB 3JCM
ELECTRON MICROSCOPY0 chains53 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
1 domainChain cview chain
1 domainChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
5 domainsChain Iview chain
3 domainsChain Jview chain
1 domainChain Kview chain
2 domainsChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
12 domainsChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainChain Wview chain
1 domainChain Xview chain
1 domainChain Yview chain
1 domainChain Zview chain
1 domainAll Domains (53)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e3jcma1 | a:1-76 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e3jcmA1 | A:130-883 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e3jcmA2 | A:884-1255 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e3jcmA3 | A:1256-1574 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e3jcmA4 | A:1829-2085 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 6 | A | e3jcmA5 | A:2148-2395 | PROCT | 2492 → 2492.1 → 2492.1.1 |
| 7 | A | e3jcmA6 | A:1575-1828 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 8 | b | e3jcmb1 | b:3-67 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | B | e3jcmB3 | B:109-465 | WD40 | 5 → 5.1 → 5.1.4 |
| 10 | c | e3jcmc1 | c:1-92 | LSM | 4 → 4.1 → 4.1.1 |
| 11 | d | e3jcmd1 | d:3-79 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | e | e3jcme1 | e:11-84 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | f | e3jcmf1 | f:4-85 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | g | e3jcmg1 | g:26-105 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | G | e3jcmG1 | G:155-178,G:211-899 | PF29376 | 109 → 109.4 → 109.4.1 |
| 16 | h | e3jcmh1 | h:1-88 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | H | e3jcmH1 | H:102-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 18 | H | e3jcmH2 | H:440-510,H:530-589 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 19 | H | e3jcmH3 | H:859-975 | EFG_C | 304 → 304.24 → 304.24.1 |
| 20 | H | e3jcmH4 | H:590-674 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 21 | H | e3jcmH5 | H:675-858 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 22 | I | e3jcmI1 | I:225-348 | Nop | 102 → 102.1 → 102.1.4 |
| 23 | I | e3jcmI2 | I:349-462 | Prp31_C | 1039 → 1039.1 → 1039.1.1 |
| 24 | I | e3jcmI3 | I:39-224 | Nop | 606 → 606.1 → 606.1.1 |
| 25 | J | e3jcmJ1 | J:5-83 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | K | e3jcmK1 | K:332-466 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 27 | K | e3jcmK2 | K:140-174,K:217-331 | PRP3 | 1040 → 1040.1 → 1040.1.1 |
| 28 | L | e3jcmL1 | L:3-141 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 29 | M | e3jcmM1 | M:1-126 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 30 | N | e3jcmN1 | N:1542-1740 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 31 | N | e3jcmN2 | N:1741-1825,N:1847-1858 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 32 | N | e3jcmN3 | N:1992-2049 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 33 | N | e3jcmN4 | N:2050-2163 | Sec63 | 11 → 11.1 → 11.1.1 |
| 34 | N | e3jcmN5 | N:906-1010 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 35 | N | e3jcmN6 | N:1859-1991 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 36 | N | e3jcmN7 | N:1199-1333 | Sec63 | 11 → 11.1 → 11.1.1 |
| 37 | N | e3jcmN8 | N:1334-1541 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 38 | N | e3jcmN9 | N:1011-1142 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 39 | N | e3jcmN10 | N:701-905 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 40 | N | e3jcmN11 | N:1143-1198 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 41 | N | e3jcmN12 | N:442-700 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 42 | O | e3jcmO1 | O:8-53,O:77-103 | LSM | 4 → 4.1 → 4.1.1 |
| 43 | P | e3jcmP1 | P:1-47,P:71-109 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | Q | e3jcmQ1 | Q:20-109 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | R | e3jcmR1 | R:5-83 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | S | e3jcmS1 | S:8-53,S:77-103 | LSM | 4 → 4.1 → 4.1.1 |
| 47 | T | e3jcmT1 | T:1-47,T:71-109 | LSM | 4 → 4.1 → 4.1.1 |
| 48 | U | e3jcmU1 | U:20-110 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | V | e3jcmV1 | V:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 50 | W | e3jcmW1 | W:11-83 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | X | e3jcmX1 | X:1-76 | LSM | 4 → 4.1 → 4.1.1 |
| 52 | Y | e3jcmY1 | Y:10-93 | LSM | 4 → 4.1 → 4.1.1 |
| 53 | Z | e3jcmZ1 | Z:11-83 | LSM | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors