ECODEvolutionary Classification of Protein Domains

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PDB 3MDJ

X-RAY DIFFRACTION2.95 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e3mdjA1(A:46-250)e3mdjA4(A:251-485,A:515-518)e3mdjA2(A:615-934)e3mdjA5(A:530-614)

Chain Bview chain

4 domains

e3mdjB1(B:46-250)e3mdjB4(B:251-485,B:515-518)e3mdjB2(B:615-934)e3mdjB5(B:530-614)

Chain Cview chain

4 domains

e3mdjC1(C:46-250)e3mdjC4(C:251-485,C:515-518)e3mdjC2(C:615-934)e3mdjC5(C:530-614)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3mdjA1	A:46-250	Peptidase_M1_N	4081 → 4081.1 → 4081.1.1
2	A	e3mdjA4	A:251-485,A:515-518	Peptidase_M1	2498 → 2498.1 → 2498.1.1
3	A	e3mdjA2	A:615-934	ERAP1_C	109 → 109.4 → 109.4.1
4	A	e3mdjA5	A:530-614	11.1.1.0	11 → 11.1 → 11.1.1
5	B	e3mdjB1	B:46-250	Peptidase_M1_N	4081 → 4081.1 → 4081.1.1
6	B	e3mdjB4	B:251-485,B:515-518	Peptidase_M1	2498 → 2498.1 → 2498.1.1
7	B	e3mdjB2	B:615-934	ERAP1_C	109 → 109.4 → 109.4.1
8	B	e3mdjB5	B:530-614	11.1.1.0	11 → 11.1 → 11.1.1
9	C	e3mdjC1	C:46-250	Peptidase_M1_N	4081 → 4081.1 → 4081.1.1
10	C	e3mdjC4	C:251-485,C:515-518	Peptidase_M1	2498 → 2498.1 → 2498.1.1
11	C	e3mdjC2	C:615-934	ERAP1_C	109 → 109.4 → 109.4.1
12	C	e3mdjC5	C:530-614	11.1.1.0	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors