PDB 3RMD
X-RAY DIFFRACTION2.98 Å0 chains16 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (16)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e3rmdA5 | A:1-375 | DNA_pol_B_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 2 | A | e3rmdA6 | A:733-902 | 4969.1.1.0 | 4969 → 4969.1 → 4969.1.1 |
| 3 | A | e3rmdA7 | A:469-574 | 4970.1.1.0 | 4970 → 4970.1 → 4970.1.1 |
| 4 | A | e3rmdA8 | A:376-468,A:575-732 | DNA_pol_B | 304 → 304.48 → 304.48.1 |
| 5 | B | e3rmdB5 | B:1-375 | DNA_pol_B_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 6 | B | e3rmdB6 | B:733-902 | 4969.1.1.0 | 4969 → 4969.1 → 4969.1.1 |
| 7 | B | e3rmdB7 | B:469-574 | 4970.1.1.0 | 4970 → 4970.1 → 4970.1.1 |
| 8 | B | e3rmdB8 | B:376-468,B:575-732 | DNA_pol_B | 304 → 304.48 → 304.48.1 |
| 9 | C | e3rmdC4 | C:1-375 | DNA_pol_B_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 10 | C | e3rmdC5 | C:733-901 | 4969.1.1.0 | 4969 → 4969.1 → 4969.1.1 |
| 11 | C | e3rmdC6 | C:469-574 | 4970.1.1.0 | 4970 → 4970.1 → 4970.1.1 |
| 12 | C | e3rmdC7 | C:376-468,C:575-732 | DNA_pol_B | 304 → 304.48 → 304.48.1 |
| 13 | D | e3rmdD5 | D:1-375 | DNA_pol_B_exo1 | 2484 → 2484.1 → 2484.1.1 |
| 14 | D | e3rmdD6 | D:733-897 | 4969.1.1.0 | 4969 → 4969.1 → 4969.1.1 |
| 15 | D | e3rmdD7 | D:469-574 | 4970.1.1.0 | 4970 → 4970.1 → 4970.1.1 |
| 16 | D | e3rmdD8 | D:376-468,D:575-732 | DNA_pol_B | 304 → 304.48 → 304.48.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors