PDB 4C2M
X-RAY DIFFRACTION2.80 Å0 chains68 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainChain 2view chain
1 domainChain 3view chain
1 domainChain 4view chain
2 domainsChain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
2 domainsChain Pview chain
9 domainsChain Qview chain
7 domainsChain Rview chain
2 domainsChain Sview chain
1 domainChain Tview chain
2 domainsChain Uview chain
1 domainChain Vview chain
2 domainsChain Wview chain
1 domainChain Xview chain
2 domainsChain Yview chain
1 domainChain Zview chain
1 domainAll Domains (68)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e4c2m11 | 1:27-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 2 | 2 | e4c2m21 | 2:8-115 | RNA_pol_I_A49 | 59 → 59.1 → 59.1.3 |
| 3 | 3 | e4c2m31 | 3:25-181 | RNA_polI_A34 | 59 → 59.1 → 59.1.3 |
| 4 | 4 | e4c2m41 | 4:126-170,4:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 5 | 4 | e4c2m42 | 4:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 6 | A | e4c2mA1 | A:1-141,A:174-273,A:312-463 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 7 | A | e4c2mA2 | A:464-505,A:581-665 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 8 | A | e4c2mA3 | A:506-580 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 9 | A | e4c2mA4 | A:666-826 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 10 | A | e4c2mA5 | A:827-1053 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 11 | A | e4c2mA6 | A:1054-1180 | 4957.2.1.0 | 4957 → 4957.2 → 4957.2.1 |
| 12 | A | e4c2mA7 | A:1181-1234,A:1545-1664 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 13 | A | e4c2mA8 | A:1235-1261,A:1498-1544 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 14 | A | e4c2mA9 | A:1262-1349,A:1361-1497 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 15 | B | e4c2mB1 | B:8-209,B:401-547 | 4010.1.1.0 | 4010 → 4010.1 → 4010.1.1 |
| 16 | B | e4c2mB2 | B:210-400 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 17 | B | e4c2mB3 | B:548-646 | RNA_pol_Rpa2_4 | 4961 → 4961.1 → 4961.1.1 |
| 18 | B | e4c2mB4 | B:647-761 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 19 | B | e4c2mB5 | B:762-798,B:912-1040 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 20 | B | e4c2mB6 | B:799-911 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 21 | B | e4c2mB7 | B:1041-1203 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 22 | C | e4c2mC1 | C:31-75,C:222-335 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 23 | C | e4c2mC2 | C:76-221 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 24 | D | e4c2mD1 | D:12-48,D:80-100 | RNA_polI_A14 | 102 → 102.1 → 102.1.1 |
| 25 | E | e4c2mE1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 26 | E | e4c2mE2 | E:4-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 27 | F | e4c2mF1 | F:55-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 28 | G | e4c2mG2 | G:126-170,G:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 29 | G | e4c2mG3 | G:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 30 | H | e4c2mH1 | H:3-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 31 | I | e4c2mI1 | I:2-67 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 32 | I | e4c2mI2 | I:68-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 33 | J | e4c2mJ1 | J:1-69 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 34 | K | e4c2mK1 | K:42-142 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 35 | L | e4c2mL1 | L:27-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 36 | M | e4c2mM1 | M:8-115 | RNA_pol_I_A49 | 59 → 59.1 → 59.1.3 |
| 37 | N | e4c2mN1 | N:24-180 | RNA_polI_A34 | 59 → 59.1 → 59.1.3 |
| 38 | O | e4c2mO1 | O:126-170,O:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 39 | O | e4c2mO2 | O:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 40 | P | e4c2mP19 | P:1-141,P:174-273,P:312-457 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 41 | P | e4c2mP20 | P:821-1047 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 42 | P | e4c2mP22 | P:660-820 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 43 | P | e4c2mP23 | P:458-499,P:575-659 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 44 | P | e4c2mP24 | P:500-574 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 45 | P | e4c2mP26 | P:1048-1168 | 4957.2.1.0 | 4957 → 4957.2 → 4957.2.1 |
| 46 | P | e4c2mP3 | P:1169-1214,P:1509-1664 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 47 | P | e4c2mP8 | P:1262-1395,P:1440-1508 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 48 | P | e4c2mP9 | P:1215-1262 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 49 | Q | e4c2mQ1 | Q:548-646 | RNA_pol_Rpa2_4 | 4961 → 4961.1 → 4961.1.1 |
| 50 | Q | e4c2mQ2 | Q:1041-1203 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 51 | Q | e4c2mQ3 | Q:8-209,Q:401-547 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 52 | Q | e4c2mQ4 | Q:762-798,Q:912-1040 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 53 | Q | e4c2mQ5 | Q:647-761 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 54 | Q | e4c2mQ6 | Q:799-911 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 55 | Q | e4c2mQ7 | Q:210-400 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 56 | R | e4c2mR1 | R:31-75,R:222-335 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 57 | R | e4c2mR2 | R:76-221 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 58 | S | e4c2mS1 | S:12-48,S:79-100 | RNA_polI_A14 | 102 → 102.1 → 102.1.1 |
| 59 | T | e4c2mT1 | T:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 60 | T | e4c2mT2 | T:4-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 61 | U | e4c2mU1 | U:55-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 62 | V | e4c2mV1 | V:14-126 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 63 | V | e4c2mV2 | V:127-176,V:215-250 | RPA43_OB | 2 → 2.1 → 2.1.1 |
| 64 | W | e4c2mW1 | W:3-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 65 | X | e4c2mX1 | X:2-67 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 66 | X | e4c2mX2 | X:68-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 67 | Y | e4c2mY1 | Y:1-69 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 68 | Z | e4c2mZ1 | Z:43-142 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors