ECODEvolutionary Classification of Protein Domains

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PDB 4CPK

X-RAY DIFFRACTION2.35 Å0 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e4cpkA1(A:327-398,A:525-668)e4cpkA2(A:399-524)e4cpkA3(A:27-138)e4cpkA4(A:168-238)e4cpkA5(A:139-167,A:239-326)

Chain Bview chain

5 domains

e4cpkB1(B:327-398,B:525-668)e4cpkB2(B:399-524)e4cpkB3(B:27-138)e4cpkB4(B:168-238)e4cpkB5(B:139-167,B:239-326)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4cpkA1	A:327-398,A:525-668	Transpeptidase	223 → 223.3 → 223.3.1
2	A	e4cpkA2	A:399-524	Transpeptidase	4019 → 4019.1 → 4019.1.1
3	A	e4cpkA3	A:27-138	MecA_N	243 → 243.1 → 243.1.1
4	A	e4cpkA4	A:168-238	308.2.1.0	308 → 308.2 → 308.2.1
5	A	e4cpkA5	A:139-167,A:239-326	PBP_dimer	3702 → 3702.1 → 3702.1.1
6	B	e4cpkB1	B:327-398,B:525-668	Transpeptidase	223 → 223.3 → 223.3.1
7	B	e4cpkB2	B:399-524	Transpeptidase	4019 → 4019.1 → 4019.1.1
8	B	e4cpkB3	B:27-138	MecA_N	243 → 243.1 → 243.1.1
9	B	e4cpkB4	B:168-238	308.2.1.0	308 → 308.2 → 308.2.1
10	B	e4cpkB5	B:139-167,B:239-326	PBP_dimer	3702 → 3702.1 → 3702.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors