ECOD
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PDB 4DK1

X-RAY DIFFRACTION3.50 Å0 chains16 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain
4 domains
e4dk1A2(A:34-43,A:271-285,A:308-332)e4dk1A3(A:90-153)e4dk1A4(A:56-89,A:154-187)e4dk1A5(A:44-55,A:188-239,A:242-270)
Chain Bview chain
4 domains
e4dk1B1(B:34-43,B:271-332)e4dk1B2(B:44-55,B:188-239,B:242-270)e4dk1B3(B:56-89,B:154-187)e4dk1B4(B:90-153)
Chain Cview chain
4 domains
e4dk1C1(C:41-43,C:271-332)e4dk1C2(C:56-89,C:154-187)e4dk1C3(C:44-55,C:188-239,C:242-270)e4dk1C4(C:90-153)
Chain Dview chain
4 domains
e4dk1D1(D:34-43,D:271-328)e4dk1D2(D:44-55,D:188-270)e4dk1D3(D:56-89,D:154-187)e4dk1D4(D:90-153)

All Domains (16)

#ChainDomain IDRangeFamilyClassification
1Ae4dk1A2A:34-43,A:271-285,A:308-3321.1.7.01 → 1.1 → 1.1.7
2Ae4dk1A3A:90-153HH_MFP_RND5086 → 5086.1 → 5086.1.1
3Ae4dk1A4A:56-89,A:154-187325.1.7.0325 → 325.1 → 325.1.7
4Ae4dk1A5A:44-55,A:188-239,A:242-270Beta-barrel_RND1 → 1.1 → 1.1.7
5Be4dk1B1B:34-43,B:271-332RND-MFP_C1 → 1.1 → 1.1.7
6Be4dk1B2B:44-55,B:188-239,B:242-270Beta-barrel_RND1 → 1.1 → 1.1.7
7Be4dk1B3B:56-89,B:154-187325.1.7.0325 → 325.1 → 325.1.7
8Be4dk1B4B:90-153HH_MFP_RND5086 → 5086.1 → 5086.1.1
9Ce4dk1C1C:41-43,C:271-332RND-MFP_C1 → 1.1 → 1.1.7
10Ce4dk1C2C:56-89,C:154-187325.1.7.0325 → 325.1 → 325.1.7
11Ce4dk1C3C:44-55,C:188-239,C:242-270Beta-barrel_RND1 → 1.1 → 1.1.7
12Ce4dk1C4C:90-153HH_MFP_RND5086 → 5086.1 → 5086.1.1
13De4dk1D1D:34-43,D:271-328RND-MFP_C1 → 1.1 → 1.1.7
14De4dk1D2D:44-55,D:188-2701.1.7.01 → 1.1 → 1.1.7
15De4dk1D3D:56-89,D:154-187325.1.7.0325 → 325.1 → 325.1.7
16De4dk1D4D:90-153HH_MFP_RND5086 → 5086.1 → 5086.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors