PDB 4F5X
X-RAY DIFFRACTION5.00 Å0 chains32 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
1 domainChain Bview chain
1 domainChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
2 domainsChain Iview chain
2 domainsChain Jview chain
2 domainsChain Kview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
2 domainsChain Nview chain
2 domainsChain Oview chain
2 domainsAll Domains (32)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4f5xA1 | A:100-880 | Rota_VP2 | 4064 → 4064.1 → 4064.1.1 |
| 2 | B | e4f5xB1 | B:71-880 | Rota_VP2 | 4064 → 4064.1 → 4064.1.1 |
| 3 | C | e4f5xC1 | C:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 4 | C | e4f5xC2 | C:1-148,C:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 5 | D | e4f5xD1 | D:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 6 | D | e4f5xD2 | D:1-148,D:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 7 | E | e4f5xE1 | E:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 8 | E | e4f5xE2 | E:1-148,E:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 9 | F | e4f5xF1 | F:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 10 | F | e4f5xF2 | F:1-148,F:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 11 | G | e4f5xG1 | G:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 12 | G | e4f5xG2 | G:1-148,G:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 13 | H | e4f5xH1 | H:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 14 | H | e4f5xH2 | H:1-148,H:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 15 | I | e4f5xI1 | I:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 16 | I | e4f5xI2 | I:1-148,I:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 17 | J | e4f5xJ1 | J:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 18 | J | e4f5xJ2 | J:1-148,J:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 19 | K | e4f5xK1 | K:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 20 | K | e4f5xK2 | K:1-148,K:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 21 | L | e4f5xL1 | L:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 22 | L | e4f5xL2 | L:1-148,L:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 23 | M | e4f5xM1 | M:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 24 | M | e4f5xM2 | M:1-148,M:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 25 | N | e4f5xN1 | N:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 26 | N | e4f5xN2 | N:1-148,N:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 27 | O | e4f5xO1 | O:149-332 | Rota_Capsid_VP6 | 10 → 10.5 → 10.5.1 |
| 28 | O | e4f5xO2 | O:1-148,O:333-397 | Rota_Capsid_VP6 | 617 → 617.1 → 617.1.1 |
| 29 | W | e4f5xW1 | W:339-672 | RdRP_4 | 304 → 304.48 → 304.48.1 |
| 30 | W | e4f5xW2 | W:772-1086 | Rotavirus_VP1 | 4962 → 4962.1 → 4962.1.1 |
| 31 | W | e4f5xW3 | W:2-257,W:280-338 | RdRP_4 | 4963 → 4963.1 → 4963.1.1 |
| 32 | W | e4f5xW4 | W:673-771 | 4967.1.1.0 | 4967 → 4967.1 → 4967.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors