ECODEvolutionary Classification of Protein Domains

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PDB 4FYD

X-RAY DIFFRACTION3.10 Å0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

6 domains

e4fydA1(A:532-815)e4fydA2(A:841-903,A:959-1072)e4fydA3(A:349-389,A:480-531)e4fydA4(A:904-958)e4fydA5(A:390-479)e4fydA6(A:1073-1242)

Chain Bview chain

6 domains

e4fydB1(B:904-958)e4fydB2(B:390-479)e4fydB3(B:1073-1242)e4fydB4(B:349-389,B:480-531)e4fydB5(B:841-903,B:959-1072)e4fydB6(B:532-815)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4fydA1	A:532-815	DNA_pol_B_exo1	2484 → 2484.1 → 2484.1.1
2	A	e4fydA2	A:841-903,A:959-1072	DNA_pol_B	304 → 304.48 → 304.48.1
3	A	e4fydA3	A:349-389,A:480-531	DNA_pol_B_exo1	2 → 2.1 → 2.1.1
4	A	e4fydA4	A:904-958	DNA_pol_B	4970 → 4970.1 → 4970.1.1
5	A	e4fydA5	A:390-479	304.114.1.0	304 → 304.114 → 304.114.1
6	A	e4fydA6	A:1073-1242	DNA_pol_B	4969 → 4969.1 → 4969.1.1
7	B	e4fydB1	B:904-958	DNA_pol_B	4970 → 4970.1 → 4970.1.1
8	B	e4fydB2	B:390-479	304.114.1.0	304 → 304.114 → 304.114.1
9	B	e4fydB3	B:1073-1242	DNA_pol_B	4969 → 4969.1 → 4969.1.1
10	B	e4fydB4	B:349-389,B:480-531	DNA_pol_B_exo1	2 → 2.1 → 2.1.1
11	B	e4fydB5	B:841-903,B:959-1072	DNA_pol_B	304 → 304.48 → 304.48.1
12	B	e4fydB6	B:532-815	DNA_pol_B_exo1	2484 → 2484.1 → 2484.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors