PDB 4GD3
X-RAY DIFFRACTION3.30 Å0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
1 domainChain Bview chain
1 domainChain Jview chain
4 domainsChain Kview chain
4 domainsChain Lview chain
4 domainsChain Mview chain
4 domainsChain Qview chain
3 domainsChain Rview chain
3 domainsChain Sview chain
3 domainsChain Tview chain
3 domainsAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4gd3A1 | A:8-210 | Ni_hydr_CYTB | 5069 → 5069.1 → 5069.1.1 |
| 2 | B | e4gd3B2 | B:8-210 | Ni_hydr_CYTB | 5069 → 5069.1 → 5069.1.1 |
| 3 | J | e4gd3J1 | J:55-97,J:490-541 | NiFeSe_Hases | 244 → 244.4 → 244.4.1 |
| 4 | J | e4gd3J2 | J:98-337,J:407-489 | NiFeSe_Hases | 4025 → 4025.1 → 4025.1.1 |
| 5 | J | e4gd3J3 | J:2-54,J:542-582 | NiFeSe_Hases, HoxH | 244 → 244.4 → 244.4.1 |
| 6 | J | e4gd3J4 | J:338-406 | NiFeSe_Hases | 4046 → 4046.1 → 4046.1.1 |
| 7 | K | e4gd3K1 | K:338-406 | NiFeSe_Hases | 4046 → 4046.1 → 4046.1.1 |
| 8 | K | e4gd3K2 | K:2-54,K:542-582 | NiFeSe_Hases, HoxH | 244 → 244.4 → 244.4.1 |
| 9 | K | e4gd3K3 | K:98-337,K:407-489 | NiFeSe_Hases | 4025 → 4025.1 → 4025.1.1 |
| 10 | K | e4gd3K4 | K:55-97,K:490-541 | NiFeSe_Hases | 244 → 244.4 → 244.4.1 |
| 11 | L | e4gd3L1 | L:338-406 | NiFeSe_Hases | 4046 → 4046.1 → 4046.1.1 |
| 12 | L | e4gd3L2 | L:55-97,L:490-541 | NiFeSe_Hases | 244 → 244.4 → 244.4.1 |
| 13 | L | e4gd3L3 | L:2-54,L:542-582 | NiFeSe_Hases, HoxH | 244 → 244.4 → 244.4.1 |
| 14 | L | e4gd3L4 | L:98-337,L:407-489 | NiFeSe_Hases | 4025 → 4025.1 → 4025.1.1 |
| 15 | M | e4gd3M1 | M:338-406 | NiFeSe_Hases | 4046 → 4046.1 → 4046.1.1 |
| 16 | M | e4gd3M2 | M:2-54,M:542-582 | NiFeSe_Hases, HoxH | 244 → 244.4 → 244.4.1 |
| 17 | M | e4gd3M3 | M:98-337,M:407-489 | NiFeSe_Hases | 4025 → 4025.1 → 4025.1.1 |
| 18 | M | e4gd3M4 | M:55-97,M:490-541 | NiFeSe_Hases | 244 → 244.4 → 244.4.1 |
| 19 | Q | e4gd3Q1 | Q:178-262 | NiFe_hyd_SSU_C | 4024 → 4024.1 → 4024.1.1 |
| 20 | Q | e4gd3Q2 | Q:1-177 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 21 | Q | e4gd3Q3 | Q:273-307 | 6071.1.1.0 | 6071 → 6071.1 → 6071.1.1 |
| 22 | R | e4gd3R1 | R:178-262 | NiFe_hyd_SSU_C | 4024 → 4024.1 → 4024.1.1 |
| 23 | R | e4gd3R2 | R:1-177 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 24 | R | e4gd3R3 | R:273-303 | 6071.1.1.0 | 6071 → 6071.1 → 6071.1.1 |
| 25 | S | e4gd3S1 | S:273-307 | 6071.1.1.0 | 6071 → 6071.1 → 6071.1.1 |
| 26 | S | e4gd3S2 | S:4-183 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 27 | S | e4gd3S3 | S:184-274 | NiFe_hyd_SSU_C | 4024 → 4024.1 → 4024.1.1 |
| 28 | T | e4gd3T1 | T:178-262 | NiFe_hyd_SSU_C | 4024 → 4024.1 → 4024.1.1 |
| 29 | T | e4gd3T2 | T:1-177 | Oxidored_q6 | 2007 → 2007.1 → 2007.1.3 |
| 30 | T | e4gd3T3 | T:273-303 | 6071.1.1.0 | 6071 → 6071.1 → 6071.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors