PDB 4KOD
X-RAY DIFFRACTION2.69 Å0 chains48 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
All Domains (48)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4kodA1 | A:22-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 2 | A | e4kodA3 | A:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 3 | A | e4kodA9 | A:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 4 | A | e4kodA10 | A:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 5 | B | e4kodB1 | B:21-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 6 | B | e4kodB3 | B:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 7 | B | e4kodB9 | B:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 8 | B | e4kodB10 | B:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 9 | C | e4kodC1 | C:23-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 10 | C | e4kodC3 | C:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 11 | C | e4kodC9 | C:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 12 | C | e4kodC10 | C:372-460 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 13 | D | e4kodD1 | D:22-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 14 | D | e4kodD3 | D:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 15 | D | e4kodD9 | D:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 16 | D | e4kodD10 | D:372-460 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 17 | E | e4kodE1 | E:23-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 18 | E | e4kodE3 | E:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 19 | E | e4kodE9 | E:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 20 | E | e4kodE10 | E:372-461 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 21 | F | e4kodF1 | F:23-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 22 | F | e4kodF3 | F:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 23 | F | e4kodF9 | F:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 24 | F | e4kodF10 | F:372-460 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 25 | G | e4kodG1 | G:23-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 26 | G | e4kodG3 | G:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 27 | G | e4kodG9 | G:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 28 | G | e4kodG10 | G:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 29 | H | e4kodH1 | H:22-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 30 | H | e4kodH3 | H:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 31 | H | e4kodH9 | H:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 32 | H | e4kodH10 | H:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 33 | I | e4kodI1 | I:20-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 34 | I | e4kodI3 | I:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 35 | I | e4kodI9 | I:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 36 | I | e4kodI10 | I:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 37 | J | e4kodJ1 | J:18-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 38 | J | e4kodJ3 | J:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 39 | J | e4kodJ9 | J:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 40 | J | e4kodJ10 | J:372-462 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 41 | K | e4kodK1 | K:23-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 42 | K | e4kodK3 | K:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 43 | K | e4kodK9 | K:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 44 | K | e4kodK10 | K:372-460 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
| 45 | L | e4kodL1 | L:18-106 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 46 | L | e4kodL3 | L:107-200 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 47 | L | e4kodL9 | L:201-371 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 48 | L | e4kodL10 | L:372-459 | AAA_lid_3 | 148 → 148.1 → 148.1.3 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors