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PDB 4O9Y

X-RAY DIFFRACTION3.50 Å0 chains80 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (80)

#ChainDomain IDRangeFamilyClassification
1Ae4o9yA1A:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
2Ae4o9yA2A:1308-1363,A:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
3Ae4o9yA3A:1364-149011.1.1.011 → 11.1 → 11.1.1
4Ae4o9yA4A:1633-1761TcA_RBD11 → 11.1 → 11.1.1
5Ae4o9yA5A:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
6Ae4o9yA6A:1091-1307,A:1581-1607Neuraminidase5 → 5.1 → 5.1.3
7Ae4o9yA7A:14-297,A:434-1090,A:1608-1632,A:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
8Ae4o9yA8A:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
9Be4o9yB1B:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
10Be4o9yB2B:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
11Be4o9yB3B:1308-1363,B:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
12Be4o9yB4B:1633-1761TcA_RBD11 → 11.1 → 11.1.1
13Be4o9yB5B:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
14Be4o9yB6B:1364-149011.1.1.011 → 11.1 → 11.1.1
15Be4o9yB7B:14-297,B:434-1090,B:1608-1632,B:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
16Be4o9yB8B:1091-1307,B:1581-1607Neuraminidase5 → 5.1 → 5.1.3
17Ce4o9yC1C:1364-149011.1.1.011 → 11.1 → 11.1.1
18Ce4o9yC2C:1633-1761TcA_RBD11 → 11.1 → 11.1.1
19Ce4o9yC3C:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
20Ce4o9yC4C:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
21Ce4o9yC5C:1091-1307,C:1581-1607Neuraminidase5 → 5.1 → 5.1.3
22Ce4o9yC6C:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
23Ce4o9yC7C:14-297,C:434-1090,C:1608-1632,C:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
24Ce4o9yC8C:1308-1363,C:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
25De4o9yD1D:1633-1761TcA_RBD11 → 11.1 → 11.1.1
26De4o9yD2D:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
27De4o9yD3D:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
28De4o9yD4D:14-297,D:434-1090,D:1608-1632,D:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
29De4o9yD5D:1308-1363,D:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
30De4o9yD6D:1091-1307,D:1581-1607Neuraminidase5 → 5.1 → 5.1.3
31De4o9yD7D:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
32De4o9yD8D:1364-149011.1.1.011 → 11.1 → 11.1.1
33Ee4o9yE1E:1364-149011.1.1.011 → 11.1 → 11.1.1
34Ee4o9yE2E:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
35Ee4o9yE3E:1308-1363,E:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
36Ee4o9yE4E:1633-1761TcA_RBD11 → 11.1 → 11.1.1
37Ee4o9yE5E:1091-1307,E:1581-1607Neuraminidase5 → 5.1 → 5.1.3
38Ee4o9yE6E:14-297,E:434-1090,E:1608-1632,E:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
39Ee4o9yE7E:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
40Ee4o9yE8E:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
41Fe4o9yF1F:1633-1761TcA_RBD11 → 11.1 → 11.1.1
42Fe4o9yF2F:1091-1307,F:1581-1607Neuraminidase5 → 5.1 → 5.1.3
43Fe4o9yF3F:14-297,F:434-1090,F:1608-1632,F:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
44Fe4o9yF4F:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
45Fe4o9yF5F:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
46Fe4o9yF6F:1364-149011.1.1.011 → 11.1 → 11.1.1
47Fe4o9yF7F:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
48Fe4o9yF8F:1308-1363,F:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
49Ge4o9yG1G:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
50Ge4o9yG2G:1091-1307,G:1581-1607Neuraminidase5 → 5.1 → 5.1.3
51Ge4o9yG3G:1308-1363,G:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
52Ge4o9yG4G:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
53Ge4o9yG5G:14-297,G:434-1090,G:1608-1632,G:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
54Ge4o9yG6G:1633-1761TcA_RBD11 → 11.1 → 11.1.1
55Ge4o9yG7G:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
56Ge4o9yG8G:1364-149011.1.1.011 → 11.1 → 11.1.1
57He4o9yH1H:1308-1363,H:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
58He4o9yH2H:1091-1307,H:1581-1607Neuraminidase5 → 5.1 → 5.1.3
59He4o9yH3H:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
60He4o9yH4H:1364-149011.1.1.011 → 11.1 → 11.1.1
61He4o9yH5H:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
62He4o9yH6H:1633-1761TcA_RBD11 → 11.1 → 11.1.1
63He4o9yH7H:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
64He4o9yH8H:14-297,H:434-1090,H:1608-1632,H:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
65Ie4o9yI1I:298-433TcdA1_RBD_311 → 11.1 → 11.1.1
66Ie4o9yI2I:1308-1363,I:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
67Ie4o9yI3I:1364-149011.1.1.011 → 11.1 → 11.1.1
68Ie4o9yI4I:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
69Ie4o9yI5I:14-297,I:434-1090,I:1608-1632,I:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
70Ie4o9yI6I:1091-1307,I:1581-1607Neuraminidase5 → 5.1 → 5.1.3
71Ie4o9yI7I:1633-1761TcA_RBD11 → 11.1 → 11.1.1
72Ie4o9yI8I:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
73Je4o9yJ1J:1308-1363,J:1491-1580TcdA1_RBD_211 → 11.1 → 11.1.1
74Je4o9yJ2J:1364-149011.1.1.011 → 11.1 → 11.1.1
75Je4o9yJ3J:1091-1307,J:1581-1607Neuraminidase5 → 5.1 → 5.1.3
76Je4o9yJ4J:1633-1761TcA_RBD11 → 11.1 → 11.1.1
77Je4o9yJ5J:1973-2327TcA_TcB_BD3834 → 3834.1 → 3834.1.1
78Je4o9yJ6J:14-297,J:434-1090,J:1608-1632,J:1762-1972Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region3833 → 3833.1 → 3833.1.1
79Je4o9yJ7J:2328-2516TcA_TcB_BD10 → 10.32 → 10.32.1
80Je4o9yJ8J:298-433TcdA1_RBD_311 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors