PDB 4O9Y
X-RAY DIFFRACTION3.50 Å0 chains80 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain Aview chain
8 domainsChain Bview chain
8 domainsChain Cview chain
8 domainsChain Dview chain
8 domainsChain Eview chain
8 domainsChain Fview chain
8 domainsChain Gview chain
8 domainsChain Hview chain
8 domainsChain Iview chain
8 domainsAll Domains (80)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4o9yA1 | A:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 2 | A | e4o9yA2 | A:1308-1363,A:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 3 | A | e4o9yA3 | A:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 4 | A | e4o9yA4 | A:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 5 | A | e4o9yA5 | A:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 6 | A | e4o9yA6 | A:1091-1307,A:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 7 | A | e4o9yA7 | A:14-297,A:434-1090,A:1608-1632,A:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 8 | A | e4o9yA8 | A:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 9 | B | e4o9yB1 | B:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 10 | B | e4o9yB2 | B:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 11 | B | e4o9yB3 | B:1308-1363,B:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 12 | B | e4o9yB4 | B:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 13 | B | e4o9yB5 | B:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 14 | B | e4o9yB6 | B:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 15 | B | e4o9yB7 | B:14-297,B:434-1090,B:1608-1632,B:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 16 | B | e4o9yB8 | B:1091-1307,B:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 17 | C | e4o9yC1 | C:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 18 | C | e4o9yC2 | C:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 19 | C | e4o9yC3 | C:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 20 | C | e4o9yC4 | C:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 21 | C | e4o9yC5 | C:1091-1307,C:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 22 | C | e4o9yC6 | C:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 23 | C | e4o9yC7 | C:14-297,C:434-1090,C:1608-1632,C:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 24 | C | e4o9yC8 | C:1308-1363,C:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 25 | D | e4o9yD1 | D:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 26 | D | e4o9yD2 | D:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 27 | D | e4o9yD3 | D:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 28 | D | e4o9yD4 | D:14-297,D:434-1090,D:1608-1632,D:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 29 | D | e4o9yD5 | D:1308-1363,D:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 30 | D | e4o9yD6 | D:1091-1307,D:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 31 | D | e4o9yD7 | D:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 32 | D | e4o9yD8 | D:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 33 | E | e4o9yE1 | E:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 34 | E | e4o9yE2 | E:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 35 | E | e4o9yE3 | E:1308-1363,E:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 36 | E | e4o9yE4 | E:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 37 | E | e4o9yE5 | E:1091-1307,E:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 38 | E | e4o9yE6 | E:14-297,E:434-1090,E:1608-1632,E:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 39 | E | e4o9yE7 | E:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 40 | E | e4o9yE8 | E:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 41 | F | e4o9yF1 | F:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 42 | F | e4o9yF2 | F:1091-1307,F:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 43 | F | e4o9yF3 | F:14-297,F:434-1090,F:1608-1632,F:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 44 | F | e4o9yF4 | F:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 45 | F | e4o9yF5 | F:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 46 | F | e4o9yF6 | F:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 47 | F | e4o9yF7 | F:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 48 | F | e4o9yF8 | F:1308-1363,F:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 49 | G | e4o9yG1 | G:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 50 | G | e4o9yG2 | G:1091-1307,G:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 51 | G | e4o9yG3 | G:1308-1363,G:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 52 | G | e4o9yG4 | G:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 53 | G | e4o9yG5 | G:14-297,G:434-1090,G:1608-1632,G:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 54 | G | e4o9yG6 | G:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 55 | G | e4o9yG7 | G:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 56 | G | e4o9yG8 | G:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 57 | H | e4o9yH1 | H:1308-1363,H:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 58 | H | e4o9yH2 | H:1091-1307,H:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 59 | H | e4o9yH3 | H:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 60 | H | e4o9yH4 | H:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 61 | H | e4o9yH5 | H:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 62 | H | e4o9yH6 | H:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 63 | H | e4o9yH7 | H:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 64 | H | e4o9yH8 | H:14-297,H:434-1090,H:1608-1632,H:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 65 | I | e4o9yI1 | I:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
| 66 | I | e4o9yI2 | I:1308-1363,I:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 67 | I | e4o9yI3 | I:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 68 | I | e4o9yI4 | I:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 69 | I | e4o9yI5 | I:14-297,I:434-1090,I:1608-1632,I:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 70 | I | e4o9yI6 | I:1091-1307,I:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 71 | I | e4o9yI7 | I:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 72 | I | e4o9yI8 | I:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 73 | J | e4o9yJ1 | J:1308-1363,J:1491-1580 | TcdA1_RBD_2 | 11 → 11.1 → 11.1.1 |
| 74 | J | e4o9yJ2 | J:1364-1490 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 75 | J | e4o9yJ3 | J:1091-1307,J:1581-1607 | Neuraminidase | 5 → 5.1 → 5.1.3 |
| 76 | J | e4o9yJ4 | J:1633-1761 | TcA_RBD | 11 → 11.1 → 11.1.1 |
| 77 | J | e4o9yJ5 | J:1973-2327 | TcA_TcB_BD | 3834 → 3834.1 → 3834.1.1 |
| 78 | J | e4o9yJ6 | J:14-297,J:434-1090,J:1608-1632,J:1762-1972 | Salmonella virulence plasmid 28.1kDa A protein / ABC toxin N-terminal region | 3833 → 3833.1 → 3833.1.1 |
| 79 | J | e4o9yJ7 | J:2328-2516 | TcA_TcB_BD | 10 → 10.32 → 10.32.1 |
| 80 | J | e4o9yJ8 | J:298-433 | TcdA1_RBD_3 | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors