PDB 4QIW
X-RAY DIFFRACTION3.50 Å0 chains50 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainsChain Cview chain
4 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
1 domainChain Hview chain
1 domainChain Jview chain
7 domainsChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
4 domainsChain Nview chain
1 domainChain Oview chain
2 domainsChain Pview chain
1 domainChain Qview chain
2 domainsChain Rview chain
1 domainChain Sview chain
1 domainChain Tview chain
1 domainChain Uview chain
1 domainChain Vview chain
1 domainChain Wview chain
1 domainAll Domains (50)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4qiwA1 | A:6-312 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e4qiwA2 | A:667-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e4qiwA3 | A:313-499 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e4qiwA4 | A:500-666 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | B | e4qiwB6 | B:485-574 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 6 | B | e4qiwB7 | B:714-751,B:877-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | B | e4qiwB8 | B:752-876 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 8 | B | e4qiwB3 | B:574-713 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 9 | B | e4qiwB9 | B:173-346 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 10 | B | e4qiwB2 | B:10-172,B:347-485 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e4qiwB5 | B:1000-1009,B:1032-1122 | 4043.1.1.0 | 4043 → 4043.1 → 4043.1.1 |
| 12 | C | e4qiwC1 | C:60-109,C:268-386 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 13 | C | e4qiwC2 | C:7-59 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 14 | C | e4qiwC3 | C:142-224 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 15 | C | e4qiwC4 | C:110-141,C:225-267 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 16 | D | e4qiwD1 | D:38-148 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 17 | D | e4qiwD2 | D:1-37,D:149-188,D:208-258 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | E | e4qiwE1 | E:79-181 | S1 | 2 → 2.1 → 2.1.1 |
| 19 | E | e4qiwE2 | E:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 20 | F | e4qiwF1 | F:1-114 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 21 | H | e4qiwH1 | H:6-81 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | I | e4qiwI1 | I:6-312 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 23 | I | e4qiwI2 | I:667-897 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 24 | I | e4qiwI3 | I:313-499 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 25 | I | e4qiwI4 | I:500-666 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 26 | J | e4qiwJ1 | J:485-574 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 27 | J | e4qiwJ2 | J:1000-1009,J:1032-1122 | 4043.1.1.0 | 4043 → 4043.1 → 4043.1.1 |
| 28 | J | e4qiwJ4 | J:10-174,J:347-484 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 29 | J | e4qiwJ5 | J:173-346 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 30 | J | e4qiwJ7 | J:714-751,J:877-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 31 | J | e4qiwJ8 | J:752-876 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 32 | J | e4qiwJ3 | J:574-713 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 33 | K | e4qiwK1 | K:2-57 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 34 | L | e4qiwL1 | L:1-94 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 35 | M | e4qiwM1 | M:142-224 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 36 | M | e4qiwM2 | M:110-141,M:225-267 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 37 | M | e4qiwM3 | M:7-59 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 38 | M | e4qiwM4 | M:60-109,M:268-386 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 39 | N | e4qiwN1 | N:1-63 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 40 | O | e4qiwO1 | O:1-37,O:149-188,O:208-258 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 41 | O | e4qiwO2 | O:38-148 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 42 | P | e4qiwP1 | P:8-49 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 43 | Q | e4qiwQ1 | Q:79-181 | S1 | 2 → 2.1 → 2.1.1 |
| 44 | Q | e4qiwQ2 | Q:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 45 | R | e4qiwR1 | R:1-114 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 46 | S | e4qiwS1 | S:6-81 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 47 | T | e4qiwT1 | T:2-57 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 48 | U | e4qiwU1 | U:1-94 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 49 | V | e4qiwV1 | V:1-63 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 50 | W | e4qiwW1 | W:8-49 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors