ECODEvolutionary Classification of Protein Domains

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PDB 4RNP

X-RAY DIFFRACTION2.60 Å0 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

5 domains

e4rnpA2(A:553-586,A:611-779)e4rnpA4(A:529-552,A:780-883)e4rnpA5(A:449-528)e4rnpA6(A:7-262)e4rnpA7(A:263-448)

Chain Bview chain

5 domains

e4rnpB1(B:529-552,B:780-883)e4rnpB2(B:553-586,B:611-779)e4rnpB3(B:449-528)e4rnpB4(B:7-262)e4rnpB5(B:263-448)

Chain Cview chain

5 domains

e4rnpC1(C:529-552,C:780-883)e4rnpC2(C:449-528)e4rnpC5(C:553-586,C:611-779)e4rnpC4(C:7-262)e4rnpC6(C:263-448)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4rnpA2	A:553-586,A:611-779	RNA_pol	4964 → 4964.1 → 4964.1.1
2	A	e4rnpA4	A:529-552,A:780-883	RNA_pol	304 → 304.48 → 304.48.1
3	A	e4rnpA5	A:449-528	RNA_pol	4966 → 4966.1 → 4966.1.1
4	A	e4rnpA6	A:7-262	RPOL_N	101 → 101.1 → 101.1.21
5	A	e4rnpA7	A:263-448	RPOL_N	4970 → 4970.1 → 4970.1.1
6	B	e4rnpB1	B:529-552,B:780-883	RNA_pol	304 → 304.48 → 304.48.1
7	B	e4rnpB2	B:553-586,B:611-779	RNA_pol	4964 → 4964.1 → 4964.1.1
8	B	e4rnpB3	B:449-528	RNA_pol	4966 → 4966.1 → 4966.1.1
9	B	e4rnpB4	B:7-262	RPOL_N	101 → 101.1 → 101.1.21
10	B	e4rnpB5	B:263-448	RPOL_N	4970 → 4970.1 → 4970.1.1
11	C	e4rnpC1	C:529-552,C:780-883	RNA_pol	304 → 304.48 → 304.48.1
12	C	e4rnpC2	C:449-528	RNA_pol	4966 → 4966.1 → 4966.1.1
13	C	e4rnpC5	C:553-586,C:611-779	RNA_pol	4964 → 4964.1 → 4964.1.1
14	C	e4rnpC4	C:7-262	RPOL_N	101 → 101.1 → 101.1.21
15	C	e4rnpC6	C:263-448	RPOL_N	4970 → 4970.1 → 4970.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors