PDB 4S20
X-RAY DIFFRACTION4.70 Å0 chains50 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
7 domainsChain Dview chain
8 domainsChain Eview chain
1 domainChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
7 domainsChain Iview chain
8 domainsChain Jview chain
1 domainChain Kview chain
5 domainsAll Domains (50)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e4s20A1 | A:6-52,A:174-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e4s20A2 | A:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e4s20B1 | B:53-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e4s20B2 | B:6-52,B:174-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | C | e4s20C1 | C:791-828,C:1060-1237 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 6 | C | e4s20C2 | C:152-225,C:345-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e4s20C3 | C:3-151,C:452-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 8 | C | e4s20C4 | C:578-713 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 9 | C | e4s20C5 | C:829-977,C:1011-1059 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 10 | C | e4s20C6 | C:1238-1342 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | C | e4s20C7 | C:714-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | D | e4s20D1 | D:378-417 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 13 | D | e4s20D2 | D:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 14 | D | e4s20D3 | D:334-377,D:418-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 15 | D | e4s20D4 | D:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 16 | D | e4s20D5 | D:1152-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 17 | D | e4s20D6 | D:12-333 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 18 | D | e4s20D7 | D:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 19 | D | e4s20D8 | D:895-930,D:1136-1151,D:1216-1376 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 20 | E | e4s20E1 | E:2-76 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 21 | F | e4s20F1 | F:6-52,F:179-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | F | e4s20F2 | F:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 23 | G | e4s20G1 | G:6-52,G:179-232 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 24 | G | e4s20G2 | G:53-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 25 | H | e4s20H1 | H:829-975,H:1014-1059 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 26 | H | e4s20H2 | H:152-225,H:345-451 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 27 | H | e4s20H3 | H:791-828,H:1060-1237 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 28 | H | e4s20H4 | H:3-152,H:450-577 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 29 | H | e4s20H5 | H:578-714 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 30 | H | e4s20H6 | H:1238-1342 | 4043.1.1.0 | 4043 → 4043.1 → 4043.1.1 |
| 31 | H | e4s20H7 | H:713-790 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 32 | I | e4s20I1 | I:895-930,I:1136-1151,I:1216-1376 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 33 | I | e4s20I2 | I:334-377,I:418-498 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 34 | I | e4s20I3 | I:1152-1215 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 35 | I | e4s20I4 | I:12-333 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 36 | I | e4s20I5 | I:639-810 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 37 | I | e4s20I6 | I:811-894 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 38 | I | e4s20I7 | I:499-638 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 39 | I | e4s20I8 | I:378-417 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 40 | J | e4s20J1 | J:2-76 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 41 | K | e4s20K1 | K:2-54 | Tudor_1_RapA | 4 → 4.1 → 4.1.1 |
| 42 | K | e4s20K2 | K:55-121 | Tudor_RapA | 4 → 4.1 → 4.1.1 |
| 43 | K | e4s20K3 | K:696-962 | RapA_C | 3509 → 3509.1 → 3509.1.1 |
| 44 | K | e4s20K4 | K:426-695 | Helicase_C,RapA_C | 2004 → 2004.1 → 2004.1.1 |
| 45 | K | e4s20K5 | K:122-425 | SNF2-rel_dom | 2004 → 2004.1 → 2004.1.1 |
| 46 | L | e4s20L1 | L:426-695 | Helicase_C,RapA_C | 2004 → 2004.1 → 2004.1.1 |
| 47 | L | e4s20L2 | L:122-425 | SNF2-rel_dom | 2004 → 2004.1 → 2004.1.1 |
| 48 | L | e4s20L3 | L:696-962 | RapA_C | 3509 → 3509.1 → 3509.1.1 |
| 49 | L | e4s20L4 | L:2-54 | Tudor_1_RapA | 4 → 4.1 → 4.1.1 |
| 50 | L | e4s20L5 | L:55-121 | Tudor_RapA | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors