Home/PDB

PDB 4V5S

X-RAY DIFFRACTION3.10 Å0 chains116 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (116)

#ChainDomain IDRangeFamilyClassification
1ABe4v5sAB1AB:7-127,AB:157-240Ribosomal_S22007 → 2007.6 → 2007.6.1
2ACe4v5sAC1AC:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
3ACe4v5sAC2AC:2-106KH_2327 → 327.11 → 327.11.1
4ADe4v5sAD1AD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
5AEe4v5sAE1AE:73-154Ribosomal_S5_C212 → 212.1 → 212.1.1
6AEe4v5sAE2AE:5-72Ribosomal_S5330 → 330.1 → 330.1.1
7AFe4v5sAF1AF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
8AGe4v5sAG1AG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
9AHe4v5sAH1AH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
10AHe4v5sAH2AH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
11AIe4v5sAI1AI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
12AJe4v5sAJ1AJ:3-100Ribosomal_S10304 → 304.44 → 304.44.1
13AKe4v5sAK1AK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
14ALe4v5sAL1AL:5-128Ribosom_S12_S232 → 2.1 → 2.1.1
15AMe4v5sAM1AM:2-125Ribosomal_S13102 → 102.2 → 102.2.1
16ANe4v5sAN1AN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
17AOe4v5sAO1AO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
18APe4v5sAP1AP:1-83Ribosomal_S16837 → 837.1 → 837.1.1
19AQe4v5sAQ1AQ:2-78Ribosomal_S172 → 2.1 → 2.1.1
20ARe4v5sAR1AR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
21ASe4v5sAS1AS:4-81Ribosomal_S19838 → 838.1 → 838.1.1
22ATe4v5sAT1AT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
23AZe4v5sAZ1AZ:213-312GTP_EFTU_D21 → 1.1 → 1.1.7
24AZe4v5sAZ2AZ:313-405GTP_EFTU_D31 → 1.1 → 1.1.8
25AZe4v5sAZ3AZ:1-41,AZ:66-212GTP_EFTU2004 → 2004.1 → 2004.1.1
26B0e4v5sB01B0:2-85Ribosomal_L27325 → 325.1 → 325.1.8
27B1e4v5sB11B1:3-95Ribosomal_L284232 → 4232.1 → 4232.1.1
28B2e4v5sB21B2:2-72Ribosomal_L29192 → 192.4 → 192.4.1
29B3e4v5sB31B3:1-59Ribosomal_L30887 → 887.1 → 887.1.1
30B4e4v5sB41B4:4-47Ribosomal_L314987 → 4987.1 → 4987.1.1
31B5e4v5sB51B5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
32B6e4v5sB61B6:5-54Ribosomal_L33375 → 375.1 → 375.1.1
33B7e4v5sB71B7:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
34B8e4v5sB81B8:2-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
35B9e4v5sB91B9:1-37Ribosomal_L36919 → 919.1 → 919.1.1
36BCe4v5sBC1BC:1-67,BC:160-228Ribosomal_L1898 → 898.1 → 898.1.1
37BCe4v5sBC2BC:68-159Ribosomal_L12007 → 2007.25 → 2007.25.1
38BDe4v5sBD1BD:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
39BDe4v5sBD2BD:2-126Ribosomal_L22 → 2.1 → 2.1.1
40BEe4v5sBE1BE:1-204Ribosomal_L31 → 1.1 → 1.1.7
41BFe4v5sBF1BF:1-207Ribosomal_L47559 → 7559.1 → 7559.1.1
42BGe4v5sBG1BG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
43BHe4v5sBH1BH:83-170Ribosomal_L6318 → 318.1 → 318.1.1
44BHe4v5sBH2BH:12-82Ribosomal_L6318 → 318.1 → 318.1.1
45BNe4v5sBN1BN:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
46BOe4v5sBO1BO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
47BPe4v5sBP1BP:5-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
48BQe4v5sBQ1BQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
49BRe4v5sBR1BR:2-118Ribosomal_L17218 → 218.3 → 218.3.1
50BSe4v5sBS1BS:11-108Ribosomal_L18p2484 → 2484.1 → 2484.1.1
51BTe4v5sBT1BT:1-137Ribosomal_L194 → 4.1 → 4.1.1
52BUe4v5sBU1BU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
53BVe4v5sBV1BV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
54BWe4v5sBW1BW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
55BXe4v5sBX1BX:3-94Ribosomal_L23304 → 304.109 → 304.109.1
56BYe4v5sBY1BY:2-101KOW,ribosomal_L244 → 4.1 → 4.1.1
57BZe4v5sBZ1BZ:93-186Ribosomal_TL5_C240 → 240.1 → 240.1.1
58BZe4v5sBZ2BZ:3-92Ribosomal_L25p239 → 239.1 → 239.1.1
59CBe4v5sCB1CB:7-127,CB:157-240Ribosomal_S22007 → 2007.6 → 2007.6.1
60CCe4v5sCC1CC:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
61CCe4v5sCC2CC:2-106KH_2327 → 327.11 → 327.11.1
62CDe4v5sCD1CD:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
63CEe4v5sCE1CE:73-154Ribosomal_S5_C212 → 212.1 → 212.1.1
64CEe4v5sCE2CE:5-72Ribosomal_S5330 → 330.1 → 330.1.1
65CFe4v5sCF1CF:1-101Ribosomal_S6304 → 304.12 → 304.12.1
66CGe4v5sCG1CG:2-156Ribosomal_S7167 → 167.1 → 167.1.1
67CHe4v5sCH1CH:1-66Ribosomal_S8320 → 320.2 → 320.2.1
68CHe4v5sCH2CH:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
69CIe4v5sCI1CI:2-128Ribosomal_S9212 → 212.1 → 212.1.1
70CJe4v5sCJ1CJ:3-100Ribosomal_S10304 → 304.44 → 304.44.1
71CKe4v5sCK1CK:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
72CLe4v5sCL1CL:5-128Ribosom_S12_S232 → 2.1 → 2.1.1
73CMe4v5sCM1CM:2-125Ribosomal_S13102 → 102.2 → 102.2.1
74CNe4v5sCN1CN:2-61Ribosomal_S14377 → 377.1 → 377.1.1
75COe4v5sCO1CO:2-89Ribosomal_S15616 → 616.1 → 616.1.1
76CPe4v5sCP1CP:1-83Ribosomal_S16837 → 837.1 → 837.1.1
77CQe4v5sCQ1CQ:2-78Ribosomal_S172 → 2.1 → 2.1.1
78CRe4v5sCR1CR:19-88Ribosomal_S18101 → 101.1 → 101.1.1
79CSe4v5sCS1CS:4-81Ribosomal_S19838 → 838.1 → 838.1.1
80CTe4v5sCT1CT:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
81CZe4v5sCZ1CZ:213-312GTP_EFTU_D21 → 1.1 → 1.1.7
82CZe4v5sCZ2CZ:313-405GTP_EFTU_D31 → 1.1 → 1.1.8
83CZe4v5sCZ3CZ:1-41,CZ:66-212GTP_EFTU2004 → 2004.1 → 2004.1.1
84D0e4v5sD01D0:2-85Ribosomal_L27325 → 325.1 → 325.1.8
85D1e4v5sD11D1:3-95Ribosomal_L284232 → 4232.1 → 4232.1.1
86D2e4v5sD21D2:2-72Ribosomal_L29192 → 192.4 → 192.4.1
87D3e4v5sD31D3:1-59Ribosomal_L30887 → 887.1 → 887.1.1
88D4e4v5sD41D4:4-47Ribosomal_L314987 → 4987.1 → 4987.1.1
89D5e4v5sD51D5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
90D6e4v5sD61D6:5-54Ribosomal_L33375 → 375.1 → 375.1.1
91D7e4v5sD71D7:1-48Ribosomal_L343074 → 3074.1 → 3074.1.1
92D8e4v5sD81D8:2-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
93D9e4v5sD91D9:1-37Ribosomal_L36919 → 919.1 → 919.1.1
94DCe4v5sDC1DC:1-67,DC:160-228Ribosomal_L1898 → 898.1 → 898.1.1
95DCe4v5sDC2DC:68-159Ribosomal_L12007 → 2007.25 → 2007.25.1
96DDe4v5sDD1DD:127-276Ribosomal_L2_C4 → 4.1 → 4.1.1
97DDe4v5sDD2DD:2-126Ribosomal_L22 → 2.1 → 2.1.1
98DEe4v5sDE1DE:1-204Ribosomal_L31 → 1.1 → 1.1.7
99DFe4v5sDF1DF:1-207Ribosomal_L47559 → 7559.1 → 7559.1.1
100DGe4v5sDG1DG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
101DHe4v5sDH1DH:83-170Ribosomal_L6318 → 318.1 → 318.1.1
102DHe4v5sDH2DH:12-82Ribosomal_L6318 → 318.1 → 318.1.1
103DNe4v5sDN1DN:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
104DOe4v5sDO1DO:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
105DPe4v5sDP1DP:5-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
106DQe4v5sDQ1DQ:1-141Ribosomal_L16325 → 325.1 → 325.1.5
107DRe4v5sDR1DR:2-118Ribosomal_L17218 → 218.3 → 218.3.1
108DSe4v5sDS1DS:11-108Ribosomal_L18p2484 → 2484.1 → 2484.1.1
109DTe4v5sDT1DT:1-137Ribosomal_L194 → 4.1 → 4.1.1
110DUe4v5sDU1DU:2-118Ribosomal_L20143 → 143.2 → 143.2.1
111DVe4v5sDV1DV:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
112DWe4v5sDW1DW:1-113Ribosomal_L22218 → 218.2 → 218.2.1
113DXe4v5sDX1DX:3-94Ribosomal_L23304 → 304.109 → 304.109.1
114DYe4v5sDY1DY:2-101KOW,ribosomal_L244 → 4.1 → 4.1.1
115DZe4v5sDZ1DZ:93-186Ribosomal_TL5_C240 → 240.1 → 240.1.1
116DZe4v5sDZ2DZ:3-92Ribosomal_L25p239 → 239.1 → 239.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors