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PDB 4V6D

X-RAY DIFFRACTION3.80 Å0 chains112 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (112)

#ChainDomain IDRangeFamilyClassification
1ABe4v6dAB1AB:8-118,AB:143-225Ribosomal_S22007 → 2007.6 → 2007.6.1
2ACe4v6dAC1AC:105-206Ribosomal_S3_C230 → 230.2 → 230.2.1
3ACe4v6dAC2AC:1-104KH_2327 → 327.11 → 327.11.1
4ADe4v6dAD1AD:1-205Ribosomal_S4,S4221 → 221.1 → 221.1.2
5AEe4v6dAE1AE:78-158Ribosomal_S5_C212 → 212.1 → 212.1.1
6AEe4v6dAE2AE:9-77Ribosomal_S5330 → 330.1 → 330.1.1
7AFe4v6dAF1AF:1-100Ribosomal_S6304 → 304.12 → 304.12.1
8AGe4v6dAG1AG:1-151Ribosomal_S7167 → 167.1 → 167.1.1
9AHe4v6dAH1AH:66-129Ribosomal_S84988 → 4988.1 → 4988.1.1
10AHe4v6dAH2AH:1-65Ribosomal_S8320 → 320.2 → 320.2.1
11AIe4v6dAI1AI:3-129Ribosomal_S9212 → 212.1 → 212.1.1
12AJe4v6dAJ1AJ:5-102Ribosomal_S10304 → 304.44 → 304.44.1
13AKe4v6dAK1AK:12-128Ribosomal_S112484 → 2484.1 → 2484.1.1
14ALe4v6dAL1AL:1-123Ribosom_S12_S232 → 2.1 → 2.1.1
15AMe4v6dAM1AM:1-114Ribosomal_S13102 → 102.2 → 102.2.1
16ANe4v6dAN1AN:1-100Ribosomal_S14377 → 377.1 → 377.1.1
17AOe4v6dAO1AO:1-88Ribosomal_S15616 → 616.1 → 616.1.1
18APe4v6dAP1AP:1-82Ribosomal_S16837 → 837.1 → 837.1.1
19AQe4v6dAQ1AQ:3-82Ribosomal_S172 → 2.1 → 2.1.1
20ARe4v6dAR1AR:19-73Ribosomal_S18101 → 101.1 → 101.1.1
21ASe4v6dAS1AS:2-80Ribosomal_S19838 → 838.1 → 838.1.1
22ATe4v6dAT1AT:2-86Ribosomal_S20p604 → 604.9 → 604.9.1
23AUe4v6dAU1AU:3-53Ribosomal_S213666 → 3666.1 → 3666.1.1
24B0e4v6dB01B0:1-56Ribosomal_L32p375 → 375.1 → 375.1.1
25B1e4v6dB11B1:3-52Ribosomal_L33375 → 375.1 → 375.1.1
26B2e4v6dB21B2:1-46Ribosomal_L343074 → 3074.1 → 3074.1.1
27B3e4v6dB31B3:1-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
28B4e4v6dB41B4:1-38Ribosomal_L36919 → 919.1 → 919.1.1
29BCe4v6dBC1BC:1-124Ribosomal_L22 → 2.1 → 2.1.1
30BCe4v6dBC2BC:125-271Ribosomal_L2_C4 → 4.1 → 4.1.1
31BDe4v6dBD1BD:1-209Ribosomal_L31 → 1.1 → 1.1.7
32BEe4v6dBE1BE:1-201Ribosomal_L47559 → 7559.1 → 7559.1.1
33BFe4v6dBF1BF:1-177Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
34BGe4v6dBG1BG:1-81Ribosomal_L6318 → 318.1 → 318.1.1
35BGe4v6dBG2BG:82-176Ribosomal_L6318 → 318.1 → 318.1.1
36BHe4v6dBH2BH:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
37BHe4v6dBH3BH:56-149Ribosomal_L9_C523 → 523.1 → 523.1.1
38BIe4v6dBI1BI:1-71Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
39BIe4v6dBI2BI:72-141Ribosomal_L11101 → 101.1 → 101.1.16
40BJe4v6dBJ1BJ:1-142Ribosomal_L132490 → 2490.2 → 2490.2.1
41BKe4v6dBK1BK:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
42BLe4v6dBL1BL:2-144Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
43BMe4v6dBM1BM:1-136325.1.5.0325 → 325.1 → 325.1.5
44BNe4v6dBN1BN:1-120Ribosomal_L17218 → 218.3 → 218.3.1
45BOe4v6dBO1BO:2-117Ribosomal_L18p2484 → 2484.1 → 2484.1.1
46BPe4v6dBP1BP:1-114Ribosomal_L194 → 4.1 → 4.1.1
47BQe4v6dBQ1BQ:1-117Ribosomal_L20143 → 143.2 → 143.2.1
48BRe4v6dBR1BR:1-103Ribosomal_L21p4186 → 4186.1 → 4186.1.1
49BSe4v6dBS1BS:1-110Ribosomal_L22218 → 218.2 → 218.2.1
50BTe4v6dBT1BT:1-93Ribosomal_L23304 → 304.109 → 304.109.1
51BUe4v6dBU1BU:1-102KOW,ribosomal_L244 → 4.1 → 4.1.1
52BVe4v6dBV1BV:1-94Ribosomal_L25p239 → 239.1 → 239.1.1
53BWe4v6dBW1BW:6-84Ribosomal_L27325 → 325.1 → 325.1.8
54BXe4v6dBX1BX:1-77Ribosomal_L284232 → 4232.1 → 4232.1.1
55BYe4v6dBY1BY:1-63Ribosomal_L29192 → 192.4 → 192.4.1
56BZe4v6dBZ1BZ:1-58Ribosomal_L30887 → 887.1 → 887.1.1
57CBe4v6dCB1CB:8-118,CB:143-225Ribosomal_S22007 → 2007.6 → 2007.6.1
58CCe4v6dCC1CC:105-206Ribosomal_S3_C230 → 230.2 → 230.2.1
59CCe4v6dCC2CC:1-104KH_2327 → 327.11 → 327.11.1
60CDe4v6dCD1CD:1-205Ribosomal_S4,S4221 → 221.1 → 221.1.2
61CEe4v6dCE1CE:78-158Ribosomal_S5_C212 → 212.1 → 212.1.1
62CEe4v6dCE2CE:9-77Ribosomal_S5330 → 330.1 → 330.1.1
63CFe4v6dCF1CF:1-100Ribosomal_S6304 → 304.12 → 304.12.1
64CGe4v6dCG1CG:2-151Ribosomal_S7167 → 167.1 → 167.1.1
65CHe4v6dCH1CH:66-129Ribosomal_S84988 → 4988.1 → 4988.1.1
66CHe4v6dCH2CH:1-65Ribosomal_S8320 → 320.2 → 320.2.1
67CIe4v6dCI1CI:3-129Ribosomal_S9212 → 212.1 → 212.1.1
68CJe4v6dCJ1CJ:5-102Ribosomal_S10304 → 304.44 → 304.44.1
69CKe4v6dCK1CK:12-128Ribosomal_S112484 → 2484.1 → 2484.1.1
70CLe4v6dCL1CL:1-123Ribosom_S12_S232 → 2.1 → 2.1.1
71CMe4v6dCM1CM:1-113Ribosomal_S13102 → 102.2 → 102.2.1
72CNe4v6dCN1CN:1-100Ribosomal_S14377 → 377.1 → 377.1.1
73COe4v6dCO1CO:1-88Ribosomal_S15616 → 616.1 → 616.1.1
74CPe4v6dCP1CP:1-80Ribosomal_S16837 → 837.1 → 837.1.1
75CQe4v6dCQ1CQ:3-82Ribosomal_S172 → 2.1 → 2.1.1
76CRe4v6dCR1CR:19-73Ribosomal_S18101 → 101.1 → 101.1.1
77CSe4v6dCS1CS:2-80Ribosomal_S19838 → 838.1 → 838.1.1
78CTe4v6dCT1CT:2-86Ribosomal_S20p604 → 604.9 → 604.9.1
79CUe4v6dCU1CU:3-53Ribosomal_S213666 → 3666.1 → 3666.1.1
80D0e4v6dD01D0:1-56Ribosomal_L32p375 → 375.1 → 375.1.1
81D1e4v6dD11D1:3-52Ribosomal_L33375 → 375.1 → 375.1.1
82D2e4v6dD21D2:1-46Ribosomal_L343074 → 3074.1 → 3074.1.1
83D3e4v6dD31D3:1-64Ribosomal_L35p4281 → 4281.1 → 4281.1.1
84D4e4v6dD41D4:1-38Ribosomal_L36919 → 919.1 → 919.1.1
85DCe4v6dDC1DC:1-124Ribosomal_L22 → 2.1 → 2.1.1
86DCe4v6dDC2DC:125-271Ribosomal_L2_C4 → 4.1 → 4.1.1
87DDe4v6dDD1DD:1-209Ribosomal_L31 → 1.1 → 1.1.7
88DEe4v6dDE1DE:1-201Ribosomal_L47559 → 7559.1 → 7559.1.1
89DFe4v6dDF1DF:1-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
90DGe4v6dDG1DG:1-81Ribosomal_L6318 → 318.1 → 318.1.1
91DGe4v6dDG2DG:82-176Ribosomal_L6318 → 318.1 → 318.1.1
92DHe4v6dDH2DH:1-55Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
93DHe4v6dDH3DH:56-149Ribosomal_L9_C523 → 523.1 → 523.1.1
94DIe4v6dDI1DI:1-71Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
95DIe4v6dDI2DI:72-141Ribosomal_L11101 → 101.1 → 101.1.16
96DJe4v6dDJ1DJ:1-142Ribosomal_L132490 → 2490.2 → 2490.2.1
97DKe4v6dDK1DK:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
98DLe4v6dDL1DL:2-144Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
99DMe4v6dDM1DM:1-136325.1.5.0325 → 325.1 → 325.1.5
100DNe4v6dDN1DN:1-120Ribosomal_L17218 → 218.3 → 218.3.1
101DOe4v6dDO1DO:2-117Ribosomal_L18p2484 → 2484.1 → 2484.1.1
102DPe4v6dDP1DP:1-114Ribosomal_L194 → 4.1 → 4.1.1
103DQe4v6dDQ1DQ:1-117Ribosomal_L20143 → 143.2 → 143.2.1
104DRe4v6dDR1DR:1-103Ribosomal_L21p4186 → 4186.1 → 4186.1.1
105DSe4v6dDS1DS:1-110Ribosomal_L22218 → 218.2 → 218.2.1
106DTe4v6dDT1DT:1-93Ribosomal_L23304 → 304.109 → 304.109.1
107DUe4v6dDU1DU:1-102KOW,ribosomal_L244 → 4.1 → 4.1.1
108DVe4v6dDV1DV:1-94Ribosomal_L25p239 → 239.1 → 239.1.1
109DWe4v6dDW1DW:6-84Ribosomal_L27325 → 325.1 → 325.1.8
110DXe4v6dDX1DX:1-77Ribosomal_L284232 → 4232.1 → 4232.1.1
111DYe4v6dDY1DY:1-63Ribosomal_L29192 → 192.4 → 192.4.1
112DZe4v6dDZ1DZ:1-58Ribosomal_L30887 → 887.1 → 887.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors