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PDB 4V87

X-RAY DIFFRACTION3.00 Å0 chains108 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (108)

#ChainDomain IDRangeFamilyClassification
1A0e4v87A01A0:1-118Ribosomal_L17218 → 218.3 → 218.3.1
2A1e4v87A11A1:2-118Ribosomal_L20143 → 143.2 → 143.2.1
3A2e4v87A21A2:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
4A3e4v87A31A3:10-85Ribosomal_L27325 → 325.1 → 325.1.8
5A4e4v87A41A4:1-66Ribosomal_L314987 → 4987.1 → 4987.1.1
6A5e4v87A51A5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
7A6e4v87A61A6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
8A7e4v87A71A7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
9A8e4v87A81A8:2-62Ribosomal_L35p4281 → 4281.1 → 4281.1.1
10ADe4v87AD1AD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
11ADe4v87AD2AD:2-126Ribosomal_L22 → 2.1 → 2.1.1
12AEe4v87AE1AE:1-205Ribosomal_L31 → 1.1 → 1.1.7
13AFe4v87AF1AF:6-208Ribosomal_L47559 → 7559.1 → 7559.1.1
14AGe4v87AG1AG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
15AHe4v87AH1AH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
16AHe4v87AH2AH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
17AKe4v87AK1AK:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
18AKe4v87AK2AK:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
19AMe4v87AM1AM:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
20ANe4v87AN1AN:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
21AOe4v87AO1AO:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
22APe4v87AP1AP:1-141Ribosomal_L16325 → 325.1 → 325.1.5
23AQe4v87AQ1AQ:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
24ARe4v87AR1AR:1-137Ribosomal_L194 → 4.1 → 4.1.1
25ASe4v87AS1AS:1-113Ribosomal_L22218 → 218.2 → 218.2.1
26ATe4v87AT1AT:3-94Ribosomal_L23304 → 304.109 → 304.109.1
27AUe4v87AU1AU:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
28AVe4v87AV1AV:93-175Ribosomal_TL5_C240 → 240.1 → 240.1.1
29AVe4v87AV2AV:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
30AWe4v87AW1AW:4-69Ribosomal_L29192 → 192.4 → 192.4.1
31AXe4v87AX1AX:2-60Ribosomal_L30887 → 887.1 → 887.1.1
32AZe4v87AZ1AZ:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
33BEe4v87BE1BE:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
34BFe4v87BF1BF:2-105KH_2327 → 327.11 → 327.11.1
35BFe4v87BF2BF:106-206Ribosomal_S3_C230 → 230.2 → 230.2.1
36BGe4v87BG1BG:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
37BHe4v87BH1BH:5-73Ribosomal_S5330 → 330.1 → 330.1.1
38BHe4v87BH2BH:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
39BIe4v87BI1BI:1-101Ribosomal_S6304 → 304.12 → 304.12.1
40BJe4v87BJ1BJ:2-156Ribosomal_S7167 → 167.1 → 167.1.1
41BKe4v87BK1BK:1-66Ribosomal_S8320 → 320.2 → 320.2.1
42BKe4v87BK2BK:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
43BLe4v87BL1BL:2-128Ribosomal_S9212 → 212.1 → 212.1.1
44BMe4v87BM1BM:3-101Ribosomal_S10304 → 304.44 → 304.44.1
45BNe4v87BN1BN:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
46BOe4v87BO1BO:2-126Ribosom_S12_S232 → 2.1 → 2.1.1
47BPe4v87BP1BP:2-117Ribosomal_S13102 → 102.2 → 102.2.1
48BQe4v87BQ1BQ:2-61Ribosomal_S14377 → 377.1 → 377.1.1
49BRe4v87BR1BR:2-89Ribosomal_S15616 → 616.1 → 616.1.1
50BSe4v87BS1BS:1-84Ribosomal_S16837 → 837.1 → 837.1.1
51BTe4v87BT1BT:2-78Ribosomal_S172 → 2.1 → 2.1.1
52BUe4v87BU1BU:17-88Ribosomal_S18101 → 101.1 → 101.1.1
53BVe4v87BV1BV:2-84Ribosomal_S19838 → 838.1 → 838.1.1
54BWe4v87BW1BW:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
55CEe4v87CE1CE:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
56CFe4v87CF1CF:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
57CFe4v87CF2CF:2-106KH_2327 → 327.11 → 327.11.1
58CGe4v87CG1CG:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
59CHe4v87CH1CH:5-73Ribosomal_S5330 → 330.1 → 330.1.1
60CHe4v87CH2CH:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
61CIe4v87CI1CI:1-101Ribosomal_S6304 → 304.12 → 304.12.1
62CJe4v87CJ1CJ:2-156Ribosomal_S7167 → 167.1 → 167.1.1
63CKe4v87CK1CK:1-66Ribosomal_S8320 → 320.2 → 320.2.1
64CKe4v87CK2CK:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
65CLe4v87CL1CL:2-128Ribosomal_S9212 → 212.1 → 212.1.1
66CMe4v87CM1CM:3-101Ribosomal_S10304 → 304.44 → 304.44.1
67CNe4v87CN1CN:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
68COe4v87CO1CO:2-126Ribosom_S12_S232 → 2.1 → 2.1.1
69CPe4v87CP1CP:2-118Ribosomal_S13102 → 102.2 → 102.2.1
70CQe4v87CQ1CQ:2-61Ribosomal_S14377 → 377.1 → 377.1.1
71CRe4v87CR1CR:2-89Ribosomal_S15616 → 616.1 → 616.1.1
72CSe4v87CS1CS:1-84Ribosomal_S16837 → 837.1 → 837.1.1
73CTe4v87CT1CT:2-78Ribosomal_S172 → 2.1 → 2.1.1
74CUe4v87CU1CU:17-88Ribosomal_S18101 → 101.1 → 101.1.1
75CVe4v87CV1CV:7-84Ribosomal_S19838 → 838.1 → 838.1.1
76CWe4v87CW1CW:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
77D0e4v87D01D0:2-118Ribosomal_L17218 → 218.3 → 218.3.1
78D1e4v87D11D1:2-118Ribosomal_L20143 → 143.2 → 143.2.1
79D2e4v87D21D2:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
80D3e4v87D31D3:9-85Ribosomal_L27325 → 325.1 → 325.1.8
81D4e4v87D41D4:1-63Ribosomal_L314987 → 4987.1 → 4987.1.1
82D5e4v87D51D5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
83D6e4v87D61D6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
84D7e4v87D71D7:1-49Ribosomal_L343074 → 3074.1 → 3074.1.1
85D8e4v87D81D8:2-62Ribosomal_L35p4281 → 4281.1 → 4281.1.1
86DDe4v87DD1DD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
87DDe4v87DD2DD:2-126Ribosomal_L22 → 2.1 → 2.1.1
88DEe4v87DE1DE:1-205Ribosomal_L31 → 1.1 → 1.1.7
89DFe4v87DF1DF:1-208Ribosomal_L47559 → 7559.1 → 7559.1.1
90DGe4v87DG1DG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
91DHe4v87DH1DH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
92DHe4v87DH2DH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
93DKe4v87DK1DK:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
94DKe4v87DK2DK:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
95DMe4v87DM1DM:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
96DNe4v87DN1DN:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
97DOe4v87DO1DO:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
98DPe4v87DP1DP:1-141Ribosomal_L16325 → 325.1 → 325.1.5
99DQe4v87DQ1DQ:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
100DRe4v87DR1DR:1-137Ribosomal_L194 → 4.1 → 4.1.1
101DSe4v87DS1DS:1-113Ribosomal_L22218 → 218.2 → 218.2.1
102DTe4v87DT1DT:3-94Ribosomal_L23304 → 304.109 → 304.109.1
103DUe4v87DU1DU:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
104DVe4v87DV1DV:93-179Ribosomal_TL5_C240 → 240.1 → 240.1.1
105DVe4v87DV2DV:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
106DWe4v87DW1DW:4-72Ribosomal_L29192 → 192.4 → 192.4.1
107DXe4v87DX1DX:2-60Ribosomal_L30887 → 887.1 → 887.1.1
108DZe4v87DZ1DZ:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors