PDB 4V8D
X-RAY DIFFRACTION3.00 Å0 chains108 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain AEview chain
1 domainChain AFview chain
2 domainsChain AGview chain
1 domainChain AHview chain
2 domainsChain AIview chain
1 domainChain AJview chain
1 domainChain AKview chain
2 domainsChain ALview chain
1 domainChain AMview chain
1 domainChain ANview chain
1 domainChain AOview chain
1 domainChain APview chain
1 domainChain AQview chain
1 domainChain ARview chain
1 domainChain ASview chain
1 domainChain ATview chain
1 domainChain AUview chain
1 domainChain AVview chain
1 domainChain AWview chain
1 domainChain B0view chain
1 domainChain B1view chain
1 domainChain B2view chain
1 domainChain B3view chain
1 domainChain B4view chain
1 domainChain B5view chain
1 domainChain B6view chain
1 domainChain B7view chain
1 domainChain B8view chain
1 domainChain BDview chain
2 domainsChain BEview chain
1 domainChain BFview chain
1 domainChain BGview chain
1 domainChain BHview chain
2 domainsChain BKview chain
2 domainsChain BMview chain
1 domainChain BNview chain
1 domainChain BOview chain
1 domainChain BPview chain
1 domainChain BQview chain
1 domainChain BRview chain
1 domainChain BSview chain
1 domainChain BTview chain
1 domainChain BUview chain
1 domainChain BVview chain
2 domainsChain BWview chain
1 domainChain BXview chain
1 domainChain BZview chain
1 domainChain CEview chain
1 domainChain CFview chain
2 domainsChain CGview chain
1 domainChain CHview chain
2 domainsChain CIview chain
1 domainChain CJview chain
1 domainChain CKview chain
2 domainsChain CLview chain
1 domainChain CMview chain
1 domainChain CNview chain
1 domainChain COview chain
1 domainChain CPview chain
1 domainChain CQview chain
1 domainChain CRview chain
1 domainChain CSview chain
1 domainChain CTview chain
1 domainChain CUview chain
1 domainChain CVview chain
1 domainChain CWview chain
1 domainChain D0view chain
1 domainChain D1view chain
1 domainChain D2view chain
1 domainChain D3view chain
1 domainChain D4view chain
1 domainChain D5view chain
1 domainChain D6view chain
1 domainChain D7view chain
1 domainChain D8view chain
1 domainChain DDview chain
2 domainsChain DEview chain
1 domainChain DFview chain
1 domainChain DGview chain
1 domainChain DHview chain
2 domainsChain DKview chain
2 domainsChain DMview chain
1 domainChain DNview chain
1 domainChain DOview chain
1 domainChain DPview chain
1 domainChain DQview chain
1 domainChain DRview chain
1 domainChain DSview chain
1 domainChain DTview chain
1 domainChain DUview chain
1 domainChain DVview chain
2 domainsChain DWview chain
1 domainChain DXview chain
1 domainChain DZview chain
1 domainAll Domains (108)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | AE | e4v8dAE1 | AE:4-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | AF | e4v8dAF1 | AF:2-105 | KH_2 | 327 → 327.11 → 327.11.1 |
| 3 | AF | e4v8dAF2 | AF:106-206 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 4 | AG | e4v8dAG1 | AG:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 5 | AH | e4v8dAH1 | AH:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 6 | AH | e4v8dAH2 | AH:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 7 | AI | e4v8dAI1 | AI:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 8 | AJ | e4v8dAJ1 | AJ:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 9 | AK | e4v8dAK1 | AK:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 10 | AK | e4v8dAK2 | AK:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 11 | AL | e4v8dAL1 | AL:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 12 | AM | e4v8dAM1 | AM:3-101 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 13 | AN | e4v8dAN1 | AN:11-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 14 | AO | e4v8dAO1 | AO:2-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 15 | AP | e4v8dAP1 | AP:2-117 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 16 | AQ | e4v8dAQ1 | AQ:4-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 17 | AR | e4v8dAR1 | AR:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 18 | AS | e4v8dAS1 | AS:1-84 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 19 | AT | e4v8dAT1 | AT:2-78 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 20 | AU | e4v8dAU1 | AU:17-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 21 | AV | e4v8dAV1 | AV:7-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 22 | AW | e4v8dAW1 | AW:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 23 | B0 | e4v8dB01 | B0:1-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 24 | B1 | e4v8dB11 | B1:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 25 | B2 | e4v8dB21 | B2:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 26 | B3 | e4v8dB31 | B3:10-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 27 | B4 | e4v8dB41 | B4:1-66 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 28 | B5 | e4v8dB51 | B5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 29 | B6 | e4v8dB61 | B6:9-53 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 30 | B7 | e4v8dB71 | B7:1-45 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 31 | B8 | e4v8dB81 | B8:2-61 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 32 | BD | e4v8dBD1 | BD:127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 33 | BD | e4v8dBD2 | BD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 34 | BE | e4v8dBE1 | BE:1-205 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 35 | BF | e4v8dBF1 | BF:6-207 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 36 | BG | e4v8dBG1 | BG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 37 | BH | e4v8dBH1 | BH:83-171 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 38 | BH | e4v8dBH2 | BH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 39 | BK | e4v8dBK1 | BK:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 40 | BK | e4v8dBK2 | BK:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 41 | BM | e4v8dBM1 | BM:1-138 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 42 | BN | e4v8dBN1 | BN:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 43 | BO | e4v8dBO1 | BO:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 44 | BP | e4v8dBP1 | BP:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 45 | BQ | e4v8dBQ1 | BQ:2-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 46 | BR | e4v8dBR1 | BR:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 47 | BS | e4v8dBS1 | BS:1-113 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 48 | BT | e4v8dBT1 | BT:3-94 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 49 | BU | e4v8dBU1 | BU:2-103 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 50 | BV | e4v8dBV1 | BV:93-175 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 51 | BV | e4v8dBV2 | BV:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 52 | BW | e4v8dBW1 | BW:4-69 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 53 | BX | e4v8dBX1 | BX:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 54 | BZ | e4v8dBZ1 | BZ:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 55 | CE | e4v8dCE1 | CE:4-240 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 56 | CF | e4v8dCF1 | CF:107-207 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 57 | CF | e4v8dCF2 | CF:2-106 | KH_2 | 327 → 327.11 → 327.11.1 |
| 58 | CG | e4v8dCG1 | CG:2-209 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 59 | CH | e4v8dCH1 | CH:5-73 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 60 | CH | e4v8dCH2 | CH:74-155 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 61 | CI | e4v8dCI1 | CI:1-101 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 62 | CJ | e4v8dCJ1 | CJ:2-156 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 63 | CK | e4v8dCK1 | CK:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 64 | CK | e4v8dCK2 | CK:67-138 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 65 | CL | e4v8dCL1 | CL:2-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 66 | CM | e4v8dCM1 | CM:3-101 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 67 | CN | e4v8dCN1 | CN:11-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 68 | CO | e4v8dCO1 | CO:2-126 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 69 | CP | e4v8dCP1 | CP:2-118 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 70 | CQ | e4v8dCQ1 | CQ:4-61 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 71 | CR | e4v8dCR1 | CR:2-89 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 72 | CS | e4v8dCS1 | CS:1-84 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 73 | CT | e4v8dCT1 | CT:2-78 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 74 | CU | e4v8dCU1 | CU:17-88 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 75 | CV | e4v8dCV1 | CV:7-84 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 76 | CW | e4v8dCW1 | CW:8-106 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 77 | D0 | e4v8dD01 | D0:2-118 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 78 | D1 | e4v8dD11 | D1:2-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 79 | D2 | e4v8dD21 | D2:1-101 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 80 | D3 | e4v8dD31 | D3:9-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 81 | D4 | e4v8dD41 | D4:1-63 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 82 | D5 | e4v8dD51 | D5:2-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 83 | D6 | e4v8dD61 | D6:9-53 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 84 | D7 | e4v8dD71 | D7:1-45 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 85 | D8 | e4v8dD81 | D8:2-61 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 86 | DD | e4v8dDD1 | DD:127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 87 | DD | e4v8dDD2 | DD:2-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 88 | DE | e4v8dDE1 | DE:1-205 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 89 | DF | e4v8dDF1 | DF:1-208 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 90 | DG | e4v8dDG1 | DG:2-182 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 91 | DH | e4v8dDH1 | DH:83-171 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 92 | DH | e4v8dDH2 | DH:2-82 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 93 | DK | e4v8dDK1 | DK:1-53 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 94 | DK | e4v8dDK2 | DK:54-146 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 95 | DM | e4v8dDM1 | DM:1-138 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 96 | DN | e4v8dDN1 | DN:1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 97 | DO | e4v8dDO1 | DO:1-150 | Ribosomal_L27A, PF29471 | 2490 → 2490.3 → 2490.3.1 |
| 98 | DP | e4v8dDP1 | DP:1-141 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 99 | DQ | e4v8dDQ1 | DQ:2-112 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 100 | DR | e4v8dDR1 | DR:1-137 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 101 | DS | e4v8dDS1 | DS:1-113 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 102 | DT | e4v8dDT1 | DT:3-94 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 103 | DU | e4v8dDU1 | DU:2-103 | KOW,ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 104 | DV | e4v8dDV1 | DV:93-179 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 105 | DV | e4v8dDV2 | DV:1-92 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 106 | DW | e4v8dDW1 | DW:4-69 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 107 | DX | e4v8dDX1 | DX:2-60 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
| 108 | DZ | e4v8dDZ1 | DZ:2-98 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors