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PDB 4V8D

X-RAY DIFFRACTION3.00 Å0 chains108 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (108)

#ChainDomain IDRangeFamilyClassification
1AEe4v8dAE1AE:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
2AFe4v8dAF1AF:2-105KH_2327 → 327.11 → 327.11.1
3AFe4v8dAF2AF:106-206Ribosomal_S3_C230 → 230.2 → 230.2.1
4AGe4v8dAG1AG:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
5AHe4v8dAH1AH:5-73Ribosomal_S5330 → 330.1 → 330.1.1
6AHe4v8dAH2AH:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
7AIe4v8dAI1AI:1-101Ribosomal_S6304 → 304.12 → 304.12.1
8AJe4v8dAJ1AJ:2-156Ribosomal_S7167 → 167.1 → 167.1.1
9AKe4v8dAK1AK:1-66Ribosomal_S8320 → 320.2 → 320.2.1
10AKe4v8dAK2AK:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
11ALe4v8dAL1AL:2-128Ribosomal_S9212 → 212.1 → 212.1.1
12AMe4v8dAM1AM:3-101Ribosomal_S10304 → 304.44 → 304.44.1
13ANe4v8dAN1AN:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
14AOe4v8dAO1AO:2-126Ribosom_S12_S232 → 2.1 → 2.1.1
15APe4v8dAP1AP:2-117Ribosomal_S13102 → 102.2 → 102.2.1
16AQe4v8dAQ1AQ:4-61Ribosomal_S14377 → 377.1 → 377.1.1
17ARe4v8dAR1AR:2-89Ribosomal_S15616 → 616.1 → 616.1.1
18ASe4v8dAS1AS:1-84Ribosomal_S16837 → 837.1 → 837.1.1
19ATe4v8dAT1AT:2-78Ribosomal_S172 → 2.1 → 2.1.1
20AUe4v8dAU1AU:17-88Ribosomal_S18101 → 101.1 → 101.1.1
21AVe4v8dAV1AV:7-84Ribosomal_S19838 → 838.1 → 838.1.1
22AWe4v8dAW1AW:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
23B0e4v8dB01B0:1-118Ribosomal_L17218 → 218.3 → 218.3.1
24B1e4v8dB11B1:2-118Ribosomal_L20143 → 143.2 → 143.2.1
25B2e4v8dB21B2:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
26B3e4v8dB31B3:10-85Ribosomal_L27325 → 325.1 → 325.1.8
27B4e4v8dB41B4:1-66Ribosomal_L314987 → 4987.1 → 4987.1.1
28B5e4v8dB51B5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
29B6e4v8dB61B6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
30B7e4v8dB71B7:1-45Ribosomal_L343074 → 3074.1 → 3074.1.1
31B8e4v8dB81B8:2-61Ribosomal_L35p4281 → 4281.1 → 4281.1.1
32BDe4v8dBD1BD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
33BDe4v8dBD2BD:2-126Ribosomal_L22 → 2.1 → 2.1.1
34BEe4v8dBE1BE:1-205Ribosomal_L31 → 1.1 → 1.1.7
35BFe4v8dBF1BF:6-207Ribosomal_L47559 → 7559.1 → 7559.1.1
36BGe4v8dBG1BG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
37BHe4v8dBH1BH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
38BHe4v8dBH2BH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
39BKe4v8dBK1BK:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
40BKe4v8dBK2BK:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
41BMe4v8dBM1BM:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
42BNe4v8dBN1BN:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
43BOe4v8dBO1BO:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
44BPe4v8dBP1BP:1-141Ribosomal_L16325 → 325.1 → 325.1.5
45BQe4v8dBQ1BQ:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
46BRe4v8dBR1BR:1-137Ribosomal_L194 → 4.1 → 4.1.1
47BSe4v8dBS1BS:1-113Ribosomal_L22218 → 218.2 → 218.2.1
48BTe4v8dBT1BT:3-94Ribosomal_L23304 → 304.109 → 304.109.1
49BUe4v8dBU1BU:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
50BVe4v8dBV1BV:93-175Ribosomal_TL5_C240 → 240.1 → 240.1.1
51BVe4v8dBV2BV:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
52BWe4v8dBW1BW:4-69Ribosomal_L29192 → 192.4 → 192.4.1
53BXe4v8dBX1BX:2-60Ribosomal_L30887 → 887.1 → 887.1.1
54BZe4v8dBZ1BZ:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1
55CEe4v8dCE1CE:4-240Ribosomal_S22007 → 2007.6 → 2007.6.1
56CFe4v8dCF1CF:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
57CFe4v8dCF2CF:2-106KH_2327 → 327.11 → 327.11.1
58CGe4v8dCG1CG:2-209Ribosomal_S4,S4221 → 221.1 → 221.1.2
59CHe4v8dCH1CH:5-73Ribosomal_S5330 → 330.1 → 330.1.1
60CHe4v8dCH2CH:74-155Ribosomal_S5_C212 → 212.1 → 212.1.1
61CIe4v8dCI1CI:1-101Ribosomal_S6304 → 304.12 → 304.12.1
62CJe4v8dCJ1CJ:2-156Ribosomal_S7167 → 167.1 → 167.1.1
63CKe4v8dCK1CK:1-66Ribosomal_S8320 → 320.2 → 320.2.1
64CKe4v8dCK2CK:67-138Ribosomal_S84988 → 4988.1 → 4988.1.1
65CLe4v8dCL1CL:2-128Ribosomal_S9212 → 212.1 → 212.1.1
66CMe4v8dCM1CM:3-101Ribosomal_S10304 → 304.44 → 304.44.1
67CNe4v8dCN1CN:11-129Ribosomal_S112484 → 2484.1 → 2484.1.1
68COe4v8dCO1CO:2-126Ribosom_S12_S232 → 2.1 → 2.1.1
69CPe4v8dCP1CP:2-118Ribosomal_S13102 → 102.2 → 102.2.1
70CQe4v8dCQ1CQ:4-61Ribosomal_S14377 → 377.1 → 377.1.1
71CRe4v8dCR1CR:2-89Ribosomal_S15616 → 616.1 → 616.1.1
72CSe4v8dCS1CS:1-84Ribosomal_S16837 → 837.1 → 837.1.1
73CTe4v8dCT1CT:2-78Ribosomal_S172 → 2.1 → 2.1.1
74CUe4v8dCU1CU:17-88Ribosomal_S18101 → 101.1 → 101.1.1
75CVe4v8dCV1CV:7-84Ribosomal_S19838 → 838.1 → 838.1.1
76CWe4v8dCW1CW:8-106Ribosomal_S20p604 → 604.9 → 604.9.1
77D0e4v8dD01D0:2-118Ribosomal_L17218 → 218.3 → 218.3.1
78D1e4v8dD11D1:2-118Ribosomal_L20143 → 143.2 → 143.2.1
79D2e4v8dD21D2:1-101Ribosomal_L21p4186 → 4186.1 → 4186.1.1
80D3e4v8dD31D3:9-85Ribosomal_L27325 → 325.1 → 325.1.8
81D4e4v8dD41D4:1-63Ribosomal_L314987 → 4987.1 → 4987.1.1
82D5e4v8dD51D5:2-60Ribosomal_L32p375 → 375.1 → 375.1.1
83D6e4v8dD61D6:9-53Ribosomal_L33375 → 375.1 → 375.1.1
84D7e4v8dD71D7:1-45Ribosomal_L343074 → 3074.1 → 3074.1.1
85D8e4v8dD81D8:2-61Ribosomal_L35p4281 → 4281.1 → 4281.1.1
86DDe4v8dDD1DD:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
87DDe4v8dDD2DD:2-126Ribosomal_L22 → 2.1 → 2.1.1
88DEe4v8dDE1DE:1-205Ribosomal_L31 → 1.1 → 1.1.7
89DFe4v8dDF1DF:1-208Ribosomal_L47559 → 7559.1 → 7559.1.1
90DGe4v8dDG1DG:2-182Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
91DHe4v8dDH1DH:83-171Ribosomal_L6318 → 318.1 → 318.1.1
92DHe4v8dDH2DH:2-82Ribosomal_L6318 → 318.1 → 318.1.1
93DKe4v8dDK1DK:1-53Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
94DKe4v8dDK2DK:54-146Ribosomal_L9_C523 → 523.1 → 523.1.1
95DMe4v8dDM1DM:1-138Ribosomal_L132490 → 2490.2 → 2490.2.1
96DNe4v8dDN1DN:1-122Ribosomal_L143174 → 3174.1 → 3174.1.1
97DOe4v8dDO1DO:1-150Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
98DPe4v8dDP1DP:1-141Ribosomal_L16325 → 325.1 → 325.1.5
99DQe4v8dDQ1DQ:2-112Ribosomal_L18p2484 → 2484.1 → 2484.1.1
100DRe4v8dDR1DR:1-137Ribosomal_L194 → 4.1 → 4.1.1
101DSe4v8dDS1DS:1-113Ribosomal_L22218 → 218.2 → 218.2.1
102DTe4v8dDT1DT:3-94Ribosomal_L23304 → 304.109 → 304.109.1
103DUe4v8dDU1DU:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
104DVe4v8dDV1DV:93-179Ribosomal_TL5_C240 → 240.1 → 240.1.1
105DVe4v8dDV2DV:1-92Ribosomal_L25p239 → 239.1 → 239.1.1
106DWe4v8dDW1DW:4-69Ribosomal_L29192 → 192.4 → 192.4.1
107DXe4v8dDX1DX:2-60Ribosomal_L30887 → 887.1 → 887.1.1
108DZe4v8dDZ1DZ:2-98Ribosomal_L284232 → 4232.1 → 4232.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors